RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ITFG1Q8TB96 612 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 EXD2Q9NVH0 621 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 WASF2Q9Y6W5 498 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 H0YC42 278 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 NDUFS4O43181 175 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 AP2A1O95782 977 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 RPS15P62841 145 aaKnown RBP13.56□□□□□ -0.24
SIX4-201ENST00000216513 TSTD2Q5T7W7 516 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 STK32CQ86UX6 486 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 UBR7Q8N806 425 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 NAT14Q8WUY8 206 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 TOE1Q96GM8 510 aaKnown RBP13.56□□□□□ -0.24
SIX4-201ENST00000216513 OR2M4Q96R27 311 aa13.56□□□□□ -0.24
SIX4-201ENST00000216513 POLR3HQ9Y535 204 aaPredicted RBP13.56□□□□□ -0.24
SIX4-201ENST00000216513 HOXA11P31270 313 aaPredicted RBP13.55□□□□□ -0.24
SIX4-201ENST00000216513 PPM1JQ5JR12 505 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 RNF43Q68DV7 783 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 C10orf107Q8IVU9 208 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 OR2T3Q8NH03 318 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 PANX1Q96RD7 426 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 GFM1Q96RP9 751 aaKnown RBP13.55□□□□□ -0.24
SIX4-201ENST00000216513 PBX4Q9BYU1 374 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 CPEB1Q9BZB8 566 aaKnown RBP13.55□□□□□ -0.24
SIX4-201ENST00000216513 KLHL4Q9C0H6 718 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 PNPOQ9NVS9 261 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 PCDH10Q9P2E7 1040 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 PSMD11O00231 422 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 NMBRP28336 390 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 C1DQ13901 141 aaKnown RBP13.55□□□□□ -0.24
SIX4-201ENST00000216513 SPOCK2Q92563 424 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 SNX15Q9NRS6 342 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 PCDHGB3Q9Y5G1 929 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 MT-ND1P03886 318 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 FUT4P22083 530 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 OTX2P32243 289 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 KCNJ2P63252 427 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 CHIT1Q13231 466 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 QPCTQ16769 361 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 FAM13CQ8NE31 585 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 AENQ8WTP8 325 aaKnown RBP13.55□□□□□ -0.24
SIX4-201ENST00000216513 ZNF599Q96NL3 588 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 SPATA5L1Q9BVQ7 753 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 B4GALT6Q9UBX8 382 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 SCN11AQ9UI33 1791 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 HAS3O00219 553 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 AP3D1O14617 1153 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 TRBC1P01850 177 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 CAPN1P07384 714 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 PAICSP22234 425 aaKnown RBP13.55□□□□□ -0.24
SIX4-201ENST00000216513 BDKRB1P46663 353 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 CDK7P50613 346 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 HNRNPLLQ8WVV9 542 aaKnown RBP13.55□□□□□ -0.24
SIX4-201ENST00000216513 MIPEPQ99797 713 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 MAFFQ9ULX9 164 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 CER1O95813 267 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 CALB2P22676 271 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 VWA5B1Q5TIE3 1220 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 GPR141Q7Z602 305 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 FAXDC2Q96IV6 333 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 DGAT2Q96PD7 388 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 MAPRE3Q9UPY8 281 aa13.55□□□□□ -0.24
SIX4-201ENST00000216513 REXO2Q9Y3B8 237 aaKnown RBP13.55□□□□□ -0.24
SIX4-201ENST00000216513 OR51F1A6NGY5 319 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 MRASO14807 208 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 AQP1P29972 269 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 TRAF7Q6Q0C0 670 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 CASP12Q6UXS9 341 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 DPY19L3Q6ZPD9 716 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 ESAMQ96AP7 390 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 TSSK3Q96PN8 268 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 ZDHHC3Q9NYG2 299 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 TAC3Q9UHF0 121 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 PCYOX1Q9UHG3 505 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 STC2O76061 302 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 MAOBP27338 520 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 RPL14P50914 215 aaKnown RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 MLLT6P55198 1093 aaPredicted RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 DEFB133Q30KQ1 61 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 GCNT7Q6ZNI0 430 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 CLPTM1LQ96KA5 538 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 C19orf25Q9UFG5 118 aaPredicted RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 RBM47A0AV96 593 aaKnown RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 A6NL46 340 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 ATP12AP54707 1039 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 HSPB3Q12988 150 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 ELAVL3Q14576 367 aaKnown RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 ZNF648Q5T619 568 aaPredicted RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 RXFP1Q9HBX9 757 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 DMAC2Q9NW81 257 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 TOR4AQ9NXH8 423 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 U3KQV3 271 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 TSPAN6O43657 245 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 KERAO60938 352 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 ATP1B2P14415 290 aaPredicted RBP13.54□□□□□ -0.24
SIX4-201ENST00000216513 ZNF30P17039 623 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 ETV3P41162 512 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 FGL2Q14314 439 aa13.54□□□□□ -0.24
SIX4-201ENST00000216513 NPY5RQ15761 445 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms