RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 UGT2B17O75795 530 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 SLITRK5O94991 958 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 TAL1P17542 331 aaPredicted RBP10.32□□□□□ -0.76
VCL-201ENST00000211998 LCN1P31025 176 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 LIMK2P53671 638 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 RGS1Q08116 209 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 DPY19L3Q6ZPD9 716 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 ERMP1Q7Z2K6 904 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 CD93Q9NPY3 652 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 TIGARQ9NQ88 270 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 TESMINQ9Y4I5 508 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 TRAV19A0A0A6YYK7 116 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 QSOX1O00391 747 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 BCAS2O75934 225 aaPredicted RBP10.32□□□□□ -0.76
VCL-201ENST00000211998 APOC3P02656 99 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 PRH1P02810 166 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 NR4A2P43354 598 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 GRM3Q14832 879 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 PTPRNQ16849 979 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 UBE2UQ5VVX9 321 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 RPTNQ6XPR3 784 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 PLEKHG7Q6ZR37 379 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 OXR1Q8N573 874 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 VMP1Q96GC9 406 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 BARD1Q99728 777 aaKnown RBP10.32□□□□□ -0.76
VCL-201ENST00000211998 ZNF350Q9GZX5 532 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 SLC39A1Q9NY26 324 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 DNMT3LQ9UJW3 386 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 FBXO10Q9UK96 956 aa10.32□□□□□ -0.76
VCL-201ENST00000211998 ACSL1P33121 698 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 SNRPD1P62314 119 aaKnown RBP10.31□□□□□ -0.76
VCL-201ENST00000211998 GPAT3Q53EU6 434 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 FAM76BQ5HYJ3 339 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 FBXL19Q6PCT2 694 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 TMEM17Q86X19 198 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 SCML4Q8N228 414 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 TSSK3Q96PN8 268 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 KLHL5Q96PQ7 755 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 AGAP2Q99490 1192 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 TCF25Q9BQ70 676 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 TUBA1CQ9BQE3 449 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 WACQ9BTA9 647 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 RNF6Q9Y252 685 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 LOC100130705A0A1B0GUX0 176 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 WWP2O00308 870 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 SERPINB7O75635 380 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 CXCR2P25025 360 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 CD40LGP29965 261 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 ERP29P30040 261 aaKnown RBP10.31□□□□□ -0.76
VCL-201ENST00000211998 RPL9P32969 192 aaKnown RBP10.31□□□□□ -0.76
VCL-201ENST00000211998 CDKN2BP42772 138 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 CDH12P55289 794 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 MTPNP58546 118 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 ARF3P61204 181 aaPredicted RBP10.31□□□□□ -0.76
VCL-201ENST00000211998 ARF1P84077 181 aaKnown RBP10.31□□□□□ -0.76
VCL-201ENST00000211998 ANXA8L1Q5VT79 327 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 LYPLAL1Q5VWZ2 237 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 SLC2A7Q6PXP3 512 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 SLC9A9Q8IVB4 645 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 PHTF2Q8N3S3 785 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 TOMM5Q8N4H5 51 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 GPR156Q8NFN8 814 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 KCTD7Q96MP8 289 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 OR52B2Q96RD2 323 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.31□□□□□ -0.761e-7■■■□□ 15
VCL-201ENST00000211998 C14orf119Q9NWQ9 140 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 OR12D3Q9UGF7 316 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 ENTPD4Q9Y227 616 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 ACADLP28330 430 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 BUD31P41223 144 aaPredicted RBP10.31□□□□□ -0.76
VCL-201ENST00000211998 JAM2P57087 298 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 UGT8Q16880 541 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 ANKDD1AQ495B1 522 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 JOSD2Q8TAC2 188 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 STOML3Q8TAV4 291 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 HAS1Q92839 578 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 P2RY11Q96G91 374 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 UPB1Q9UBR1 384 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 POLR1DQ9Y2S0 133 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 KRBA1A5PL33 1030 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 STMND1H3BQB6 276 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 ADAMDEC1O15204 470 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 COQ9O75208 318 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 AFF1P51825 1210 aaKnown RBP10.31□□□□□ -0.76
VCL-201ENST00000211998 TSPAN5P62079 268 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 SPRED3Q2MJR0 410 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 FBXO43Q4G163 708 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 FSTL4Q6MZW2 842 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 CYP20A1Q6UW02 462 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 DCAKDQ8WVC6 231 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 ZNF607Q96SK3 696 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 PFDN5Q99471 154 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 WDR18Q9BV38 432 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 SLC39A8Q9C0K1 460 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 TMEM168Q9H0V1 697 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 TMEM59LQ9UK28 342 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 CMAHPQ9Y471 501 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 ZNF536O15090 1300 aa10.31□□□□□ -0.76
VCL-201ENST00000211998 PLSCR1O15162 318 aa10.3□□□□□ -0.76
VCL-201ENST00000211998 TGFB1I1O43294 461 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms