RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 UBE2FQ969M7 185 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 ZNF451Q9Y4E5 1061 aa14.86□□□□□ -0.03
EFNB1-201ENST00000204961 MBL2P11226 248 aaPredicted RBP14.85□□□□□ -0.03
EFNB1-201ENST00000204961 CKBP12277 381 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 FMO3P31513 532 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 SLC11A1P49279 550 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 IL5RAQ01344 420 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 CD300CQ08708 224 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 ABRAXAS1Q6UWZ7 409 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 TSPAN33Q86UF1 283 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 PHYKPLQ8IUZ5 450 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 LINC01599Q8WXQ3 324 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 BIRC8Q96P09 236 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 HOPXQ9BPY8 73 aaPredicted RBP14.85□□□□□ -0.03
EFNB1-201ENST00000204961 MIR1-1HGQ9H1L0 117 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 ACTR3BQ9P1U1 418 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 CRLS1Q9UJA2 301 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 PAIP2BQ9ULR5 123 aaKnown RBP14.85□□□□□ -0.03
EFNB1-201ENST00000204961 PCDHB8Q9UN66 801 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 ST14Q9Y5Y6 855 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 PRAMEF1O95521 474 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 TGFBR1P36897 503 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 PIGAP37287 484 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 TXNL4AP83876 142 aaKnown RBP14.85□□□□□ -0.03
EFNB1-201ENST00000204961 TXNDC8Q6A555 127 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 GOLGA7Q7Z5G4 137 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 L3HYPDHQ96EM0 354 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 CLPBQ9H078 707 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 TOR3AQ9H497 397 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 RIBC2Q9H4K1 309 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 SELENONQ9NZV5 590 aa14.85□□□□□ -0.03
EFNB1-201ENST00000204961 LEF1Q9UJU2 399 aaPredicted RBP14.85□□□□□ -0.03
EFNB1-201ENST00000204961 ACSL4O60488 711 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ESRRBO95718 433 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 MLYCDO95822 493 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 CCT8P50990 548 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 NKG7Q16617 165 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 MAPKAPK3Q16644 382 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 CYBRD1Q53TN4 286 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ARTNQ5T4W7 220 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 R3HCC1LQ7Z5L2 792 aaKnown RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 BTLAQ7Z6A9 289 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 SERPINA9Q86WD7 417 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 CD200R1Q8TD46 325 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 TRMOQ9BU70 441 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 TRIM62Q9BVG3 475 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 DPY30Q9C005 99 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ACTR8Q9H981 624 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ARNT2Q9HBZ2 717 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 GREB1Q4ZG55 1949 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 LOC730098B7Z3J9 87 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 COCHO43405 550 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 FAM163BP0C2L3 166 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ATF6P18850 670 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 RFC2P35250 354 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 MASP1P48740 699 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 SLC11A2P49281 568 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 CDK9P50750 372 aaKnown RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 TRAP1Q12931 704 aaKnown RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 CDH18Q13634 790 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 GTF2H2Q13888 395 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 GRAMD4Q6IC98 578 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 GTF2H2CQ6P1K8 395 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ANKS3Q6ZW76 656 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 SLC24A5Q71RS6 500 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ZNF366Q8N895 744 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 OR2T12Q8NG77 320 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 EID2BQ96D98 161 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 MYRFLQ96LU7 910 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 BARD1Q99728 777 aaKnown RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 FEM1AQ9BSK4 669 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 NPLQ9BXD5 320 aaPredicted RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ANKRD60Q9BZ19 345 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 TIMMDC1Q9NPL8 285 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ZNF490Q9ULM2 529 aaPredicted RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 SH3GLB1Q9Y371 365 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 PCDHA9Q9Y5H5 950 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 H3BMQ9 156 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ACOX3O15254 700 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 FKBP9O95302 570 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 GBAP04062 536 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 SMAD3P84022 425 aaKnown RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 FKBP9P1Q75LS8 142 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ARL14EPQ8N8R7 260 aaPredicted RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ROPN1LQ96C74 230 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 COG8Q96MW5 612 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 OR52E6Q96RD3 313 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 DPH2Q9BQC3 489 aaPredicted RBP14.84□□□□□ -0.03
EFNB1-201ENST00000204961 POLE4Q9NR33 117 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 ZNF232Q9UNY5 417 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 PCDHB7Q9Y5E2 793 aa14.84□□□□□ -0.03
EFNB1-201ENST00000204961 CHD7Q9P2D1 2997 aa14.83□□□□□ -0.03
EFNB1-201ENST00000204961 PQBP1O60828 265 aaKnown RBP14.83□□□□□ -0.04
EFNB1-201ENST00000204961 CYP11A1P05108 521 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 STK19P49842 368 aaPredicted RBP14.83□□□□□ -0.04
EFNB1-201ENST00000204961 ATP6V0D1P61421 351 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 COLGALT2Q8IYK4 626 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 TMEM199Q8N511 208 aa14.83□□□□□ -0.04
EFNB1-201ENST00000204961 BEND7Q8N7W2 519 aaPredicted RBP14.83□□□□□ -0.04
EFNB1-201ENST00000204961 FNDC8Q8TC99 324 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms