RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Zfp282E9PVC2 666 aa18.21■□□□□ 0.51
Trim71-201ENSMUST00000111816 Zfp607bG3X9H3 648 aa18.21■□□□□ 0.51
Trim71-201ENSMUST00000111816 St14P56677 855 aa18.21■□□□□ 0.51
Trim71-201ENSMUST00000111816 Cln6Q3U466 308 aa18.21■□□□□ 0.51
Trim71-201ENSMUST00000111816 Mtfr1Q99MB2 328 aa18.21■□□□□ 0.51
Trim71-201ENSMUST00000111816 Myg1Q9JK81 380 aa18.21■□□□□ 0.51
Trim71-201ENSMUST00000111816 Klhl15A2AAX3 604 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm4181E9Q7X3 184 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Anxa11P97384 503 aaKnown RBP18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Bop1P97452 732 aaKnown RBP18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Slc9b2Q5BKR2 547 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Prkd1Q62101 918 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mapk3Q63844 380 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Spata7Q80VP2 582 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Shc2Q8BMC3 573 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Krt33aQ8K0Y2 404 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Angptl8Q8R1L8 198 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Acsl6Q91WC3 697 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Q9D4A5 307 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Epb41l4bQ9JMC8 527 aa18.21■□□□□ 0.5
Trim71-201ENSMUST00000111816 Clip3B9EHT4 547 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Vmn2r100E9QAZ9 850 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rfpl4bJ3QPR6 266 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Sh3pxd2aO89032 1124 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tbrg1Q3UB74 406 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Obox3Q3UT54 335 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 BC080695Q66JY9 481 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ppp1r14dQ7TT52 146 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Q8BGN9 141 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm5662Q8BX20 144 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ptbp2Q91Z31 531 aaKnown RBP18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 FancgQ9EQR6 623 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Dlg5E9Q9R9 1921 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 ItpkbB2RXC2 942 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fabp3P11404 133 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 ProcrQ64695 242 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr412Q7TRW7 312 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Trex1Q91XB0 314 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tbx18Q9EPZ6 613 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 CtsmQ9JL96 333 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Wdr62Q3U3T8 1523 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm10324L7N208 604 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Psme2P97372 239 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Kctd19Q562E2 927 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Msantd2Q6NZR2 559 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tas2r125Q7M710 311 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Eipr1Q8K0G5 386 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 QpctQ9CYK2 362 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Lama4P97927 1816 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Abca7Q91V24 2159 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Guca2bO09051 106 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Dnajb14Q149L6 379 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Jak3Q62137 1100 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cacna1bO55017 2327 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 CpdO89001 1377 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tpst2O88856 376 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fth1P09528 182 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ddx6P54823 483 aaKnown RBP18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Zdhhc15Q8BGJ0 337 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mterf2Q8BKY8 385 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Srp68Q8BMA6 625 aaKnown RBP18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gm37240E9QAY5 252 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Ap2a1P17426 977 aaKnown RBP18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Fam46cQ5SSF7 391 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr213Q7TS32 327 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Eif4bQ8BGD9 611 aaKnown RBP18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rnf121Q8R1Z9 327 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mri1Q9CQT1 369 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Satl1Q9D5N8 744 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Nme9A0A1L1SUL6 329 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Vmn2r48E9Q5D8 855 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cops4O88544 406 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tp53i13Q5F267 385 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tbc1d17Q8BYH7 645 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gyg1Q9R062 333 aa18.2■□□□□ 0.5
Trim71-201ENSMUST00000111816 Vmn2r56E9Q4U5 779 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Vmn2r55G3UWZ4 781 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gria2P23819 883 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Pld2P97813 933 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Xkr4Q5GH67 647 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Sec24dQ6NXL1 1032 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Usp50Q6P8X6 390 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Olfr1106Q7TR57 312 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Slc39a9Q8BFU1 308 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Trim61Q8JZK6 461 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Q8WUR0 141 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Mthfd1Q922D8 935 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Borcs7Q9CRC6 105 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Tomm20lQ9D4V6 152 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Atp7bQ64446 1462 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 CtssO70370 340 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gabrb2P63137 512 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Rps17P63276 135 aaKnown RBP18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Sez6l2Q4V9Z5 910 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 FkbplO35450 347 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Gtf2f2Q8R0A0 249 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 SpartQ8R1X6 671 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Cnot11Q9CWN7 505 aa18.19■□□□□ 0.5
Trim71-201ENSMUST00000111816 Sppl2aQ9JJF9 523 aa18.19■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 39.1 ms