RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gm5407E9Q7Q1 248 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cma1P21844 247 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ranbp9P69566 653 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Eif2ak2Q03963 515 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Syndig1lQ3USQ7 237 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 KizQ3UXL4 695 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Coq8aQ60936 645 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rxfp4Q7TQP4 414 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr855Q7TRF8 312 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem121Q80XA0 318 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fstl5Q8BFR2 847 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp595Q8BIN6 625 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem209Q8BRG8 561 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Snx8Q8CFD4 459 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Hid1Q8R1F6 788 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ddx1Q91VR5 740 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Mzt2Q9CQ25 159 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 FancgQ9EQR6 623 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tor1bQ9ER41 336 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Capn15Q9JLG8 1095 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cdh22Q9WTP5 813 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fignl2J3QK54 644 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rps14P62264 151 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Usp39Q3TIX9 564 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Alg10bQ3UGP8 474 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Kbtbd8Q3UQV5 599 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Znrf3Q5SSZ7 913 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pkp4Q68FH0 1190 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 AY358078Q6UY53 465 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 MroQ7TNB4 248 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 NapepldQ8BH82 396 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cndp1Q8BUG2 492 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Q8BWQ6 963 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ace2Q8R0I0 805 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rsph1Q8VIG3 301 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pcdhga11Q91XY8 933 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Pycr2Q922Q4 320 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem135Q9CYV5 458 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tex44Q9DA60 530 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tmem174Q9DCX7 243 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Serpini2Q9JK88 405 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 SqorQ9R112 450 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ank1Q02357 1862 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ttll11A4Q9F4 727 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Vmn1r76F8VQ63 324 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ifngr1P15261 477 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gstm5P48774 224 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Mpp1P70290 466 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Krt76Q3UV17 594 aaKnown RBP10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Aldh16a1Q571I9 802 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ifi47Q61635 420 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr1105Q7TR58 312 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Erich5Q8K0S2 362 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Vmn1r24Q8R2D6 296 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 MecrQ9DCS3 373 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PyglQ9ET01 850 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 UxtQ9WTZ0 157 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PrebQ9WUQ2 417 aa10.17□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Znf518bB2RRE4 1077 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fbrsl1E9Q9T0 1031 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Atn1O35126 1175 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Prf1P10820 554 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PlaaP27612 794 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PgfP49764 158 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Mrpl10Q3TBW2 262 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Scn2bQ56A07 215 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zfp78Q5U406 512 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PtprrQ62132 656 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Svs1Q6WIZ7 820 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 1700001K19RikQ80ZT1 219 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Sema3dQ8BH34 777 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 SowahcQ8C0J6 512 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lurap1lQ8K2P1 221 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Defb19Q8K3I8 83 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ankrd54Q91WK7 299 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Chid1Q922Q9 393 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ern1Q9EQY0 977 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Cpxm1Q9Z100 722 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Zbtb12Q9Z150 459 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Gm12394A2AKP6 982 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fam71dD3YV92 440 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Tpst2O88856 376 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 UoxP25688 303 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 CtskP55097 329 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ap2m1P84091 435 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 PrkczQ02956 592 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Lrrc58Q3UGP9 366 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 LchnQ3UHG7 455 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Ppm1hQ3UYC0 513 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Sf1Q64213 653 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Olfr1313Q7TQW8 311 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Kirrel1Q80W68 789 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Dlgap2Q8BJ42 1059 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 UnkQ8BL48 810 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Parp12Q8BZ20 711 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Fam46bQ8C152 427 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Nudt13Q8JZU0 352 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Asb17Q8VHP9 295 aa10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Rab14Q91V41 215 aaKnown RBP10.16□□□□□ -0.78
Ccdc40-201ENSMUST00000035935 Msh4Q99MT2 958 aa10.16□□□□□ -0.78
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms