RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Lcp2Q60787 533 aaKnown RBP13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Creb3Q61817 404 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 DbhQ64237 622 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tmem130Q6NXM3 419 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ubtd2Q6PGH0 234 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Mib1Q80SY4 1006 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Arhgef38Q80VK6 770 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Q810N5 247 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 AW551984Q8BGF0 804 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Prpf18Q8BM39 342 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Rbms3Q8BWL5 431 aaKnown RBP13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Il31raQ8K5B1 716 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Agr3Q8R3W7 165 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cyp4a12aQ91WL5 508 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Syt12Q920N7 421 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 MpstQ99J99 297 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Alpk2Q91ZB0 2144 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Pcm1Q9R0L6 2025 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Btbd35f28A2CFD5 498 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Mybpc1D3YU50 1127 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Btbd35f30J3QML3 498 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Fv4P11370 679 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ugt2b17P17717 530 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Map3k7clP58500 142 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cd163Q2VLH6 1121 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 ArsiQ32KI9 573 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cpa6Q5U901 438 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 FaddQ61160 205 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 BadQ61337 204 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nfe2l1Q61985 741 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 BegainQ68EF6 600 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cpa4Q6P8K8 420 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ppp2r2bQ6ZWR4 443 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nacc1Q7TSZ8 514 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Susd6Q8BGE4 302 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm6377Q8BHV4 303 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Prdm8Q8BZ97 687 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Psapl1Q8C1C1 522 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Fam221bQ8C627 487 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 N4bp2l2Q8JZS6 575 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ugt2b38Q91WH2 530 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 CtsqQ91ZF4 343 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Oxct1Q9D0K2 520 aaKnown RBP13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Oxct2bQ9ESL0 520 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 B4galt4Q9JJ04 344 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Oxct2aQ9JJN4 520 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Nectin1Q9JKF6 515 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 DguokQ9QX60 277 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 B9d1Q9R1S0 204 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Casp8ap2Q9WUF3 1962 aa13.25□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gabrr3B2RXA8 464 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zfp758E9QAA1 583 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 BgnP28653 369 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Irs1P35569 1233 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Grik2P39087 908 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Btbd1P58544 488 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Isl1P61372 349 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Emx1Q04742 257 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm7030Q0WXH6 285 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cyp2c65Q148B1 490 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Abraxas2Q3TCJ1 415 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Hhla1Q3TYV2 514 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Parp8Q3UD82 852 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 MthfsdQ3URQ7 372 aaKnown RBP13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Prss53Q571E5 552 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Brsk1Q5RJI5 778 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Phf12Q5SPL2 1003 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gpr171Q8BG55 319 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 UnkQ8BL48 810 aaKnown RBP13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gucy1b2Q8BXH3 824 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 GneQ91WG8 722 aaKnown RBP13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gjd3Q91YD1 278 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Mrpl1Q99N96 336 aaKnown RBP13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gemin2Q9CQQ4 269 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Pin1Q9QUR7 165 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Plxna4Q80UG2 1893 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Umodl1Q5DID3 1319 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Tbc1d25A1A5B6 742 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Slc43a3A2AVZ9 502 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Zfp362B1ASA5 418 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gm6569D3YTM9 175 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ncam2O35136 837 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ptger3P30557 365 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Vbp1P61759 196 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Kcnk2P97438 426 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Dnajc15Q78YY6 149 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gpr22Q8BZL4 432 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Thop1Q8C1A5 687 aaKnown RBP13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Adgrf1Q8VEC3 908 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr665Q8VG79 316 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Olfr807Q8VGI9 311 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 DcxrQ91X52 244 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Pcdhga11Q91XY8 933 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Q9CZV2 255 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 Cog8Q9JJA2 640 aa13.24□□□□□ -0.29
Nup88-201ENSMUST00000035283 6720489N17RikA0A1Y7VJW0 127 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 5830411N06RikB3F5L4 1112 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Ackr2O08707 378 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 Gpr50O88495 591 aa13.23□□□□□ -0.29
Nup88-201ENSMUST00000035283 HunkO88866 714 aa13.23□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms