RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Psmb9P28076 219 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Sept4P28661 478 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Rpl9P51410 192 aaKnown RBP18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Arf5P84084 180 aaKnown RBP18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Patl1Q3TC46 770 aaKnown RBP18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Trim40Q3UWA4 246 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Olfml2bQ3V1G4 746 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Mrm3Q5ND52 418 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Abcb7Q61102 752 aaKnown RBP18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Defa17Q64016 82 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gpr139Q80UC8 345 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Bcas1Q80YN3 633 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Aldh4a1Q8CHT0 562 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Dach2Q925Q8 634 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Znf639Q99KZ6 485 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Q9D1K7 174 aaKnown RBP18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Batf3Q9D275 118 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 TrilQ9DBY4 809 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Cmtm7Q9ESD6 167 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vmn1r49Q9WUF1 310 aa18.13■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Tbkbp1A2A9T0 611 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Phf11cB4XVP9 339 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Xpnpep3B7ZMP1 506 aaKnown RBP18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm8334F7CD45 553 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Emp3O35912 163 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Dync1i2O88487 612 aaKnown RBP18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Matn4O89029 624 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Serpina3kP07759 418 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Inpp1P49442 396 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Cyp2c37P56654 490 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Q3KNL4 93 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Itga2Q62469 1178 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ubr7Q8BU04 425 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Dmtf1Q8CE22 761 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Plcl2Q8K394 1128 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Pqbp1Q91VJ5 263 aaKnown RBP18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Golga7Q91W53 137 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Efcab1Q9D3N2 212 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Map2k5Q9WVS7 448 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm30302A0A1Y7VN40 1110 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Pnldc1B2RXZ1 531 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vmn2r10K7N621 847 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Fkbp7O54998 218 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ptpn5P54830 541 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Psme2P97372 239 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 PrkczQ02956 592 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm1604bQ3TRG0 118 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Magee2Q52KG3 523 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Nfe2l2Q60795 597 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Samd3Q8C4H2 520 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Lsm1Q8VC85 133 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Mospd1Q8VEL0 213 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Art4Q9CRA0 300 aa18.12■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Dlgap4B1AZP2 992 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Sec14l5B2RXM5 696 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Fam151bD3YUE4 279 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vmn2r21K7N6Y7 853 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vmn2r20L7N2B1 853 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ring1O35730 406 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Impdh2P24547 514 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Eif2ak2Q03963 515 aaKnown RBP18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Inf2Q0GNC1 1273 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Adam2Q60718 735 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Nr6a1Q64249 495 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Parp12Q8BZ20 711 aaKnown RBP18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Slc49a3Q8CE47 516 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 ManbaQ8K2I4 879 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ebf4Q8K4J2 599 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Hid1Q8R1F6 788 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Slc5a2Q923I7 670 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 NtpcrQ9CQA9 190 aaKnown RBP18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 ArskQ9D2L1 553 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Tas2r119Q9JKT2 335 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Fhl5Q9WTX7 284 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ighv11-1A0A075B5R6 117 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm4871D3Z0W7 314 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Aff2O55112 1272 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 CidecP56198 239 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Cyp2c38P56655 490 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Kcnj13P86046 360 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Fut7Q11131 389 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm4951Q3UED7 406 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Creb3Q61817 404 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Tas2r106Q7M724 308 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Syt14Q7TN84 555 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Vtcn1Q7TSP5 283 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ifi44Q8BV66 422 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Nrif1Q923B3 828 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Rnf181Q9CY62 165 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Ola1Q9CZ30 396 aaKnown RBP18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 S100a14Q9D2Q8 104 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 AgkQ9ESW4 421 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Kcne5Q9QZ26 143 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Plod2Q9R0B9 737 aa18.11■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Olfr625-ps1A0A140T8L4 321 aa18.1■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm10406A6NAS4 205 aa18.1■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm3373A6NAS7 205 aa18.1■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm3298E9PW80 205 aa18.1■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 Gm3667K7N757 205 aa18.1■□□□□ 0.49
Ccdc3-201ENSMUST00000027988 PrkacbP68181 351 aa18.1■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms