RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Hdac7Q8C2B3 938 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 TbceQ8CIV8 524 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ugt3a2Q8JZZ0 523 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Acsm1Q91VA0 573 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 AslQ91YI0 464 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Slc25a36Q922G0 311 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gkn2Q9CQS6 184 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cib1Q9Z0F4 191 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr49Q9Z1V0 313 aa9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Zcchc11B2RX14 1644 aaKnown RBP9.07□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm4756A0A140LIS8 335 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Mfsd13bA0A1L1SUA2 455 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fam151bD3YUE4 279 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 AU018091E9PWS4 684 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Obox6G3X9U1 347 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr618K7N6B3 318 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Has3O08650 554 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cer1O55233 272 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fbxo40P62932 710 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cd300lgQ1ERP8 331 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Wdr75Q3U821 830 aaKnown RBP9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fcrl5Q68SN8 596 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tmc6Q7TN60 810 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr1105Q7TR58 312 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Orai2Q8BH10 250 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fut11Q8BHC9 489 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Hpf1Q8CFE2 346 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Zfp617Q91WM0 559 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pcdhb18Q91Y02 792 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Teddm3Q9CQH1 294 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cdh13Q9WTR5 714 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 VarsQ9Z1Q9 1263 aaKnown RBP9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Itm2bO89051 266 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 ApoeP08226 311 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 R3hdm4Q4VBF2 262 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Nr2e1Q64104 385 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Coro2bQ8BH44 480 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Spp2Q8K1I3 203 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Lhfpl3Q9CTN8 222 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rsph9Q9D9V4 276 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fabp12Q9DAK4 132 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Taf8Q9EQH4 308 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rab25Q9WTL2 213 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cps1Q8C196 1500 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 TroapB7ZNG4 668 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 G430095P16RikE9Q913 147 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr171G5E8J1 314 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm13128L7MU96 475 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Slc22a2O70577 553 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PnpP23492 289 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Il1rnP25085 178 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Laptm5Q61168 261 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Bnip1Q6QD59 228 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tceal3Q8R0A5 200 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ranbp3Q9CT10 491 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Mrpl45Q9D0Q7 306 aaKnown RBP9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 NtsQ9D3P9 169 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 ClpxQ9JHS4 634 aaKnown RBP9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Rad18Q9QXK2 509 aaKnown RBP9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ap1m2Q9WVP1 423 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ralgps1A2AR50 585 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ttll6A4Q9E8 822 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Esp22A8R0V4 111 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dnase1l3O55070 310 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Kcnq1P97414 668 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pi4k2aQ2TBE6 479 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Marveld2Q3UZP0 555 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Cnpy1Q4VAB4 94 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PkdccQ5RJI4 492 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Snta1Q61234 503 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gja3Q64448 417 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Styk1Q6J9G1 429 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 HjurpQ6PG16 667 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Kctd13Q8BGV7 329 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 SynpoQ8CC35 929 aaKnown RBP9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr606Q8VGZ8 319 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Ccdc166S4R181 449 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Abcc10Q8R4P9 1501 aa9.06□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Dip2bQ3UH60 1574 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm37596A0A0A6YXL2 336 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Fam46aD3Z5S8 447 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Gm16434J3QN10 205 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 4930555G01RikL7N253 205 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Vmn2r57L7N269 863 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 NsmafO35242 920 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Nxpe2Q3U095 558 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 RbfaQ6P3B9 350 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Tatdn1Q6P8M1 295 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 PdgfrlQ6PE55 375 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Galnt7Q80VA0 657 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Q8BHG2 160 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Plekha1Q8BUL6 383 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Trmt10aQ8C1Z8 328 aaKnown RBP9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Plcz1Q8K4D7 647 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Grhl2Q8K5C0 625 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 McmbpQ8R3C0 642 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr826Q8VFU6 313 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Olfr825Q8VFU7 320 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Pcdhga6Q91XY2 932 aa9.05□□□□□ -0.96
Ccdc47-201ENSMUST00000002043 Arpc2Q9CVB6 300 aa9.05□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms