RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 RAET1GQ6H3X3 334 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 IRGCQ6NXR0 463 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 MACC1Q6ZN28 852 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 RINLQ6ZS11 566 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TRIM67Q6ZTA4 783 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 FRA10AC1Q70Z53 315 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TRMT11Q7Z4G4 463 aaKnown RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TECPR1Q7Z6L1 1165 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 RALGPS2Q86X27 583 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 MYLK4Q86YV6 388 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TREML1Q86YW5 311 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 SCUBE1Q8IWY4 988 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 MYO1HQ8N1T3 1032 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 TMEM151AQ8N4L1 468 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 SLC44A3Q8N4M1 653 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 HDDC3Q8N4P3 179 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 PPFIBP2Q8ND30 876 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 STAG3L4Q8TBR4 150 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 DNAJC9Q8WXX5 260 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 RAB7BQ96AH8 199 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 DTD2Q96FN9 168 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 RILPQ96NA2 401 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 PANX3Q96QZ0 392 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 PHF7Q9BWX1 381 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 HDAC8Q9BY41 377 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 ILKAPQ9H0C8 392 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CDH19Q9H159 772 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 RSPH9Q9H1X1 276 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 SPATS2LQ9NUQ6 558 aaKnown RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 KCTD5Q9NXV2 234 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 CD274Q9NZQ7 290 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 FAM8A1Q9UBU6 413 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 NKX1-2Q9UD57 310 aaPredicted RBP8.73□□□□□ -1.01
PHGDH-219ENST00000641513 MED16Q9Y2X0 877 aa8.73□□□□□ -1.01
PHGDH-219ENST00000641513 A0A1W2PP55 124 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 PRR23AA6NEV1 266 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 NCF1BA6NI72 391 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 AGAP14A8MT82 685 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 NCF1CA8MVU1 366 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 FADS2P1A8MWK0 482 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 AREL1O15033 823 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 NVLO15381 856 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 SPINT1O43278 529 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 NARSO43776 548 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 NPHS1O60500 1241 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 KERAO60938 352 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 ENTPD5O75356 428 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 RNASEH2AO75792 299 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 RECQL5O94762 991 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 SUPT7LO94864 414 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 DNTTP04053 509 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 CHRNGP07510 517 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 ATP1B2P14415 290 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 NCF1P14598 390 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 FOSL2P15408 326 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 C5AR1P21730 350 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 DGKAP23743 735 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 MPSTP25325 297 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 PBLDP30039 288 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 KIR2DL1P43626 348 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 CCR10P46092 362 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 KCNC1P48547 511 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 IDH3AP50213 366 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 COPAP53621 1224 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 DNAJB13P59910 316 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 RPS14P62263 151 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 CAMK2GQ13555 558 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 GTF2H3Q13889 308 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 BOP1Q14137 746 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 KPNB1Q14974 876 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 CCDC6Q16204 474 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 PFKFB4Q16877 469 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 KHDC1Q4VXA5 237 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 ARL13AQ5H913 290 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 LDLRAP1Q5SW96 308 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 HENMT1Q5T8I9 393 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 KIAA1211LQ6NV74 962 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 EPGNQ6UW88 154 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 LRRC74BQ6ZQY2 392 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 Q7L0L9 218 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 PIWIL4Q7Z3Z4 852 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 GPSM1Q86YR5 675 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 TMEM126BQ8IUX1 230 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 RAVER1Q8IY67 606 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 ULK2Q8IYT8 1036 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 FBXO39Q8N4B4 442 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 ZNF781Q8N8C0 355 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 PTGR2Q8N8N7 351 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 RBM15BQ8NDT2 890 aaKnown RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 OR2T3Q8NH03 318 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 RHEBL1Q8TAI7 183 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 ACTRT2Q8TDY3 377 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 SKA2Q8WVK7 121 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 BTN2A2Q8WVV5 523 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 EZH1Q92800 747 aaPredicted RBP8.72□□□□□ -1.01
PHGDH-219ENST00000641513 DNASE1L2Q92874 299 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 HLA-CQ95604 372 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 GLYATL1Q969I3 302 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 KIAA1191Q96A73 305 aa8.72□□□□□ -1.01
PHGDH-219ENST00000641513 COQ10AQ96MF6 247 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms