RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 PCDHA9Q9Y5H5 950 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 AP4B1Q9Y6B7 739 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 TRIM43BA6NCK2 446 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 AGAP14A8MT82 685 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 EFCAB14O75071 495 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 EEDO75530 441 aaKnown RBP16.81■□□□□ 0.28
PHGDH-211ENST00000641213 BAIAP3O94812 1187 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 CSPG5O95196 566 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 CXCL14O95715 111 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 ZNF26P17031 533 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-211ENST00000641213 GRIA3P42263 894 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 HSPA7P48741 367 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 POLR2JP52435 117 aaKnown RBP16.81■□□□□ 0.28
PHGDH-211ENST00000641213 LRRC26Q2I0M4 334 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 PAGE3Q5JUK9 113 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 IL27RAQ6UWB1 636 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 FNDC5Q8NAU1 212 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 KREMEN2Q8NCW0 462 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 PIP4K2CQ8TBX8 421 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 TRIM43Q96BQ3 446 aaPredicted RBP16.81■□□□□ 0.28
PHGDH-211ENST00000641213 IPPKQ9H8X2 491 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 ZIM2Q9NZV7 527 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 CCL26Q9Y258 94 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 HS3ST2Q9Y278 367 aa16.81■□□□□ 0.28
PHGDH-211ENST00000641213 C15orf38-AP3S2A0A0A6YYH1 394 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 CXorf51AA0A1B0GTR3 108 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 ZNF839A8K0R7 811 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 BNIP3LO60238 219 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 KATNA1O75449 491 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 LINC00271P0C7V0 271 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 CHRM1P11229 460 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-211ENST00000641213 CCR2P41597 374 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 TRAF3Q13114 568 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 NFYCQ13952 458 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 PHKG1Q16816 387 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 FUT11Q495W5 492 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 IRAK1BP1Q5VVH5 260 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 C22orf39Q6P5X5 142 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 TPRG1Q6ZUI0 275 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 ARPINQ7Z6K5 226 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 ST13P4Q8IZP2 240 aaPredicted RBP16.8■□□□□ 0.28
PHGDH-211ENST00000641213 PROKR1Q8TCW9 393 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 SLC22A17Q8WUG5 538 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 TMEM125Q96AQ2 219 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 EME1Q96AY2 570 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 ISG20Q96AZ6 181 aaKnown RBP16.8■□□□□ 0.28
PHGDH-211ENST00000641213 ECHDC3Q96DC8 303 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 SCRN2Q96FV2 425 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 TRIM54Q9BYV2 358 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 TRIM8Q9BZR9 551 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 SUV39H2Q9H5I1 410 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 ASAH2Q9NR71 780 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 TLR9Q9NR96 1032 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 UBAP1Q9NZ09 502 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 CNOT6Q9ULM6 557 aaKnown RBP16.8■□□□□ 0.28
PHGDH-211ENST00000641213 SNX13Q9Y5W8 968 aa16.8■□□□□ 0.28
PHGDH-211ENST00000641213 CCDC154A6NI56 674 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 CCL16O15467 120 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 AP1G1O43747 822 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 OTCP00480 354 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 IL12AP29459 219 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 HSPA13P48723 471 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 PTPN5P54829 565 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 CDKL1Q00532 357 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 BNIP2Q12982 314 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 SPATS1Q496A3 300 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 LRRC66Q68CR7 880 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 ASTLQ6HA08 431 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-211ENST00000641213 HMBOX1Q6NT76 420 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 ADGRG2Q8IZP9 1017 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 TMEM199Q8N511 208 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 CANT1Q8WVQ1 401 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 GBP5Q96PP8 586 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 TRAPPC9Q96Q05 1148 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 EFHD1Q9BUP0 239 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 APOL5Q9BWW9 433 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 HCFC1R1Q9NWW0 138 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 EGFL7Q9UHF1 273 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 PPIL1Q9Y3C6 166 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 FAM234BA2RU67 622 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 ADH1AP07327 375 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 MILR1Q7Z6M3 343 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 KLHL23Q8NBE8 558 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 DNAJB14Q8TBM8 379 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 ASIC4Q96FT7 647 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 HBEGFQ99075 208 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 EGFL8Q99944 293 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 TMEM79Q9BSE2 394 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 FAM192AQ9GZU8 254 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 COQ10BQ9H8M1 238 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 LATS2Q9NRM7 1088 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 HEBP1Q9NRV9 189 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 ARMC1Q9NVT9 282 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 TMEM45AQ9NWC5 275 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 SUN2Q9UH99 717 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 LEF1Q9UJU2 399 aaPredicted RBP16.79■□□□□ 0.28
PHGDH-211ENST00000641213 AK5Q9Y6K8 562 aa16.79■□□□□ 0.28
PHGDH-211ENST00000641213 LAMA2P24043 3122 aaKnown RBP16.78■□□□□ 0.28
PHGDH-211ENST00000641213 MKI67P46013 3256 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms