RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 TXLNGQ9NUQ3 528 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 ZNF69Q9UC07 566 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 POU2F3Q9UKI9 436 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 PADI1Q9ULC6 663 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 ZNF711Q9Y462 761 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 UBR5O95071 2799 aaPredicted RBP3.12□□□□□ -1.91
ATM-230ENST00000640388 FRYLO94915 3013 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 TECTAO75443 2155 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 SMCHD1A6NHR9 2005 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 FLT4P35916 1363 aa3.12□□□□□ -1.91
ATM-230ENST00000640388 WDFY3Q8IZQ1 3526 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 NFAT5O94916 1531 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 A0A087WYN8 130 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 GRID2O43424 1007 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 SH3BP5O60239 455 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 LMX1BO60663 402 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 SEC14L2O76054 403 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 NKX2-2O95096 273 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 EGFP01133 1207 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 CDH1P12830 882 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 HLA-DOBP13765 273 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 S1PR1P21453 382 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 MCM3P25205 808 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 CORO1AP31146 461 aaKnown RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 ELF1P32519 619 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 KRT9P35527 623 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 GNL1P36915 607 aaPredicted RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 CCR9P51686 369 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 FUT6P51993 359 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 RPL7AP62424 266 aaKnown RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 CSNK2A1P68400 391 aaPredicted RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 OLR1P78380 273 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 FOXM1Q08050 763 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 ARL16Q0P5N6 197 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 SREBF2Q12772 1141 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 TROAPQ12815 778 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 SHHQ15465 462 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 CCNG2Q16589 344 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 SYT16Q17RD7 645 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 CXorf66Q5JRM2 361 aaPredicted RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 GFRALQ6UXV0 394 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 GDPD4Q6W3E5 623 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 DSTYKQ6XUX3 929 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 SLC9B2Q86UD5 537 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 DIS3L2Q8IYB7 885 aaKnown RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 RNF113BQ8IZP6 322 aaKnown RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 MUC20Q8N307 709 aaPredicted RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 PCDH20Q8N6Y1 951 aaKnown RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 PCYOX1LQ8NBM8 494 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 CSNK2A3Q8NEV1 391 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 OR14L1PQ8NHC6 308 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 BBS10Q8TAM1 723 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 HMGCLL1Q8TB92 370 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 LNX1Q8TBB1 728 aaPredicted RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 IGSF8Q969P0 613 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 ZNF622Q969S3 477 aaKnown RBP eCLIP3.11□□□□□ -1.915e-7■□□□□ 9.2
ATM-230ENST00000640388 INTS12Q96CB8 462 aaKnown RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 MMABQ96EY8 250 aaPredicted RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 CDCA5Q96FF9 252 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 GRAMD2BQ96HH9 432 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 HARBI1Q96MB7 349 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 TMEM68Q96MH6 324 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 PPM1MQ96MI6 270 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 NODALQ96S42 347 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 PCYT2Q99447 389 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 PCGF1Q9BSM1 259 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 SEBOXQ9HB31 216 aaPredicted RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 ACSS1Q9NUB1 689 aaPredicted RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 IRAK4Q9NWZ3 460 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 DLGAP2Q9P1A6 1054 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 CNOT8Q9UFF9 292 aaKnown RBP3.11□□□□□ -1.91
ATM-230ENST00000640388 TMEM98Q9Y2Y6 226 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 AMDHD2Q9Y303 409 aa3.11□□□□□ -1.91
ATM-230ENST00000640388 SPTAN1Q13813 2472 aaKnown RBP3.1□□□□□ -1.91
ATM-230ENST00000640388 PLXNA1Q9UIW2 1896 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 H0YIN7 160 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 C16orf97H3BN30 126 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 SPINT2O43291 252 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 RTN3O95197 1032 aaPredicted RBP3.1□□□□□ -1.91
ATM-230ENST00000640388 MYOD1P15172 320 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 ITGA2P17301 1181 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 TM4SF1P30408 202 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 RFC4P35249 363 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 PBX3P40426 434 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 RGS2P41220 211 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 CCR10P46092 362 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 F2RL1P55085 397 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 ISL1P61371 349 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 SP3Q02447 781 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 GRIK2Q13002 908 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 TBX2Q13207 712 aaPredicted RBP3.1□□□□□ -1.91
ATM-230ENST00000640388 TSTQ16762 297 aaKnown RBP3.1□□□□□ -1.91
ATM-230ENST00000640388 CCDC96Q2M329 555 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 DPCR1Q3MIW9 517 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 SOWAHCQ53LP3 525 aaPredicted RBP3.1□□□□□ -1.91
ATM-230ENST00000640388 ZNF628Q5EBL2 1059 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 JAKMIP3Q5VZ66 844 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 ZNF280DQ6N043 979 aa3.1□□□□□ -1.91
ATM-230ENST00000640388 TMED8Q6PL24 325 aaPredicted RBP3.1□□□□□ -1.91
ATM-230ENST00000640388 FOXL2NBQ6ZUU3 175 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms