RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 LYSMD3Q7Z3D4 306 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 TSPAN33Q86UF1 283 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 RHOT1Q8IXI2 618 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 CCNYQ8ND76 341 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 SEC14L1Q92503 715 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 ZNF599Q96NL3 588 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 NUDCD1Q96RS6 583 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 TUBGCP5Q96RT8 1024 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 SLC38A3Q99624 504 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 ERP44Q9BS26 406 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 CENPHQ9H3R5 247 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 C10orf88Q9H8K7 445 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 SLAMF7Q9NQ25 335 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 RBM22Q9NW64 420 aaKnown RBP eCLIP13.55□□□□□ -0.24
HLA-C-210ENST00000640219 LUZP4Q9P127 313 aa13.55□□□□□ -0.24
HLA-C-210ENST00000640219 MYO1CO00159 1063 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 APOL1O14791 398 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 TTI1O43156 1089 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 RECKO95980 971 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 CPP00450 1065 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 JCHAINP01591 159 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 KRT14P02533 472 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 CEACAM5P06731 702 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 MYCLP1P12525 358 aaPredicted RBP13.54□□□□□ -0.24
HLA-C-210ENST00000640219 ZNF28P17035 718 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 LHCGRP22888 699 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 CTNNA2P26232 953 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 CDKN2BP42772 138 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 AP1S1P61966 158 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 CTBSQ01459 385 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 DHX9Q08211 1270 aaKnown RBP13.54□□□□□ -0.24
HLA-C-210ENST00000640219 AP1B1Q10567 949 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 NR6A1Q15406 480 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 SLC9A4Q6AI14 798 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 JMJD6Q6NYC1 403 aaPredicted RBP13.54□□□□□ -0.24
HLA-C-210ENST00000640219 BRAT1Q6PJG6 821 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 MAP7D3Q8IWC1 876 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 TEX26Q8N6G2 289 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 GALNT6Q8NCL4 622 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.54□□□□□ -0.24
HLA-C-210ENST00000640219 NCSTNQ92542 709 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 MAML1Q92585 1016 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 MAGOHBQ96A72 148 aaKnown RBP13.54□□□□□ -0.24
HLA-C-210ENST00000640219 STAMBPL1Q96FJ0 436 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 ZNF641Q96N77 438 aaPredicted RBP13.54□□□□□ -0.24
HLA-C-210ENST00000640219 FMO2Q99518 471 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 FAM118BQ9BPY3 351 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 DPH5Q9H2P9 285 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 PHPT1Q9NRX4 125 aaPredicted RBP13.54□□□□□ -0.24
HLA-C-210ENST00000640219 SUFUQ9UMX1 484 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 PCDHGA9Q9Y5G4 932 aaKnown RBP13.54□□□□□ -0.24
HLA-C-210ENST00000640219 ST14Q9Y5Y6 855 aa13.54□□□□□ -0.24
HLA-C-210ENST00000640219 NF1P21359 2839 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 TRBV23OR9-2A0A075B6M9 112 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 NPIPB15A6NHN6 443 aaPredicted RBP13.53□□□□□ -0.24
HLA-C-210ENST00000640219 NDUFAB1O14561 156 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 MATN3O15232 486 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 HTRA2O43464 458 aaPredicted RBP13.53□□□□□ -0.24
HLA-C-210ENST00000640219 KIAA0754O94854 1291 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 ELFN1P0C7U0 828 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 ADCY8P40145 1251 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 MDH1P40925 334 aaKnown RBP13.53□□□□□ -0.24
HLA-C-210ENST00000640219 ACTR1BP42025 376 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CCT5P48643 541 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 RENBPP51606 427 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CCL11P51671 97 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 RWDD2BP57060 319 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CORO7P57737 925 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 ACTR1AP61163 376 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 FOXM1Q08050 763 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 NSUN2Q08J23 767 aaKnown RBP eCLIP13.53□□□□□ -0.24
HLA-C-210ENST00000640219 GRM3Q14832 879 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CNGA3Q16281 694 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 ZRANB3Q5FWF4 1079 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 LIPIQ6XZB0 460 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 SPOCD1Q6ZMY3 1216 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 DPPA4Q7L190 304 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CCDC50Q8IVM0 306 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CNTD1Q8N815 330 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 Q8NA96 180 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 ARRDC2Q8TBH0 407 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 NSMCE1Q8WV22 266 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 HEMGNQ9BXL5 484 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 MFRPQ9BY79 579 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 UNKQ9C0B0 810 aaKnown RBP13.53□□□□□ -0.24
HLA-C-210ENST00000640219 STMN4Q9H169 189 aaPredicted RBP13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CNOT10Q9H9A5 744 aaKnown RBP13.53□□□□□ -0.24
HLA-C-210ENST00000640219 MLXIPLQ9NP71 852 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 KLHL3Q9UH77 587 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CD84Q9UIB8 345 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 ENTPD4Q9Y227 616 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CHKBQ9Y259 395 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.53□□□□□ -0.24
HLA-C-210ENST00000640219 PCDHGA6Q9Y5G7 932 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 CELSR1Q9NYQ6 3014 aa13.53□□□□□ -0.24
HLA-C-210ENST00000640219 A0A087WUV0 522 aaPredicted RBP13.52□□□□□ -0.25
HLA-C-210ENST00000640219 CST8O60676 142 aa13.52□□□□□ -0.25
HLA-C-210ENST00000640219 PGLSO95336 258 aa13.52□□□□□ -0.25
HLA-C-210ENST00000640219 CBX6O95503 412 aa13.52□□□□□ -0.25
HLA-C-210ENST00000640219 MMP2P08253 660 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms