RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 PDXPQ96GD0 296 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 AIFM3Q96NN9 605 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 B3GNT5Q9BYG0 378 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 XYLT2Q9H1B5 865 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 SLC6A20Q9NP91 592 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TNPO3Q9Y5L0 923 aaKnown RBP3.37□□□□□ -1.87
CCDC7-213ENST00000639290 TENM3Q9P273 2699 aa3.37□□□□□ -1.87
CCDC7-213ENST00000639290 A0A0D9SFI3 127 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 KIR2DS5A0A0G2JLQ3 304 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 A0A0G2JNG1 304 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 A0A1W2PQ72 361 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 ARHGEF35A5YM69 484 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 OR5H15A6NDH6 313 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 GOLGA8SH3BPF8 625 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 KLRC4-KLRK1H3BQV0 150 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 KIR2DS3K7RE56 304 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 DDX3XO00571 662 aaKnown RBP eCLIP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 BMP10O95393 424 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 HPP00738 406 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 F13BP05160 661 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 IVLP07476 585 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 NID1P14543 1247 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 NME2P22392 152 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 AMPD1P23109 780 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 MMP11P24347 488 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 RENBPP51606 427 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 DDX10Q13206 875 aaKnown RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 DCTN2Q13561 401 aaKnown RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 KIR2DS5Q14953 304 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 TAF5Q15542 800 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SPRED3Q2MJR0 410 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 TUBB8Q3ZCM7 444 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SCARA3Q6AZY7 606 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 NCAPH2Q6IBW4 605 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 FAM199XQ6PEV8 388 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 EPM2AIP1Q7L775 607 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 NKAPQ8N5F7 415 aaKnown RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SH2D3CQ8N5H7 860 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 DCAF4L2Q8NA75 395 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SCAMP5Q8TAC9 235 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 PROKR1Q8TCW9 393 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 HCAR2Q8TDS4 363 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 TBCKQ8TEA7 893 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 EDARADDQ8WWZ3 215 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SCMH1Q96GD3 660 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 C1orf159Q96HA4 380 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 OSBPL1AQ9BXW6 950 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 ZNF518BQ9C0D4 1074 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SNX25Q9H3E2 840 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 FANCEQ9HB96 536 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 CEP83Q9Y592 693 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SRPRBQ9Y5M8 271 aaKnown RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 MMP24Q9Y5R2 645 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 A0A096LPE4 126 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 A0A1B0GUS0 222 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 A0A1W2PPZ6 126 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 AREL1O15033 823 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SRGAP2O75044 1071 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 CTSLP07711 333 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 CD48P09326 243 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 NHLRC4P0CG21 123 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 TRIM21P19474 475 aaKnown RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 UQCRC1P31930 480 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 TYRO3Q06418 890 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 FAPQ12884 760 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 MTA1Q13330 715 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 OLIG2Q13516 323 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 CASC10Q5T4H9 136 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 YOD1Q5VVQ6 348 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 MZT2AQ6P582 158 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 WDR59Q6PJI9 974 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 KRT77Q7Z794 578 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 SRLQ86TD4 932 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 CD163Q86VB7 1156 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 VPS36Q86VN1 386 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 TMEM126BQ8IUX1 230 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 TMEM178AQ8NBL3 297 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 WFDC5Q8TCV5 224 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 CXorf40AQ8TE69 158 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 PROX1Q92786 737 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 GAL3ST3Q96A11 431 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 UBXN6Q9BZV1 441 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 BHLHE41Q9C0J9 482 aaPredicted RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 MUC3BQ9H195 1237 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 OSER1Q9NX31 292 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 NOP53Q9NZM5 478 aaKnown RBP3.36□□□□□ -1.87
CCDC7-213ENST00000639290 PCDHB10Q9UN67 800 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 PCDHA7Q9UN72 937 aa3.36□□□□□ -1.87
CCDC7-213ENST00000639290 OR14I1A6ND48 311 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 BCKDKO14874 412 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 PRKD3O94806 890 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 TIAF1O95411 115 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 TDP2O95551 362 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 IGLV3-27P01718 113 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CSF3P09919 207 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 MAPTP10636 758 aaKnown RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 HARSP12081 509 aaKnown RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CYLC1P35663 651 aaPredicted RBP3.35□□□□□ -1.87
CCDC7-213ENST00000639290 SCNN1BP51168 640 aa3.35□□□□□ -1.87
CCDC7-213ENST00000639290 CACNA2D1P54289 1103 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms