RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 B3GNT8Q7Z7M8 397 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 AMIGO1Q86WK6 493 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 CNTN4Q8IWV2 1026 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 TTLQ8NG68 377 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 CSPG4P5Q96PW8 444 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 FYTTD1Q96QD9 318 aaKnown RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 IL1RL2Q9HB29 575 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 ZBTB20Q9HC78 741 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 FBXO40Q9UH90 709 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 ATP6V1HQ9UI12 483 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 CPSF3Q9UKF6 684 aaKnown RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 A0A075B6Q4 140 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 TOR1AO14656 332 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 BCKDKO14874 412 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 OGTO15294 1046 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 XPNPEP2O43895 674 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 CILPO75339 1184 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 EEDO75530 441 aaKnown RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 IFNA16P05015 189 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 SERPINF2P08697 491 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 HNRNPLP14866 589 aaKnown RBP eCLIP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 NCK1P16333 377 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 PSMB4P28070 264 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 CTSKP43235 329 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 MGAT3Q09327 533 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 PGM5Q15124 567 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 FSCN1Q16658 493 aaKnown RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 TOR1AIP1Q5JTV8 583 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 CES3Q6UWW8 571 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 EFL1Q7Z2Z2 1120 aaKnown RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 MICU2Q8IYU8 434 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 RDH10Q8IZV5 341 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 FNDC5Q8NAU1 212 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 DNAJA4Q8WW22 397 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 CLEC4DQ8WXI8 215 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 POP5Q969H6 163 aaKnown RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 C19orf60Q96EN9 201 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 UCK2Q9BZX2 261 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 NGRNQ9NPE2 291 aaKnown RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 SRRDQ9UH36 339 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 TEKT2Q9UIF3 430 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 TMPRSS11EQ9UL52 423 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 PNMA8BQ9ULN7 279 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-221ENST00000638141 IPPQ9Y573 584 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 USP3Q9Y6I4 520 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 NRCAMQ92823 1304 aa11.86□□□□□ -0.51
CAPN3-221ENST00000638141 SOWAHBA6NEL2 793 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 G3V3G9 751 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 MAP3K6O95382 1288 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 CBLP22681 906 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 YWHAQP27348 245 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 EMX2Q04743 252 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 TRIP4Q15650 581 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 CDO1Q16878 200 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 KIF19Q2TAC6 998 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 DCAF8Q5TAQ9 597 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 CAPN13Q6MZZ7 669 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 LCLAT1Q6UWP7 414 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 SYVN1Q86TM6 617 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 OR4M2Q8NGB6 313 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 OR5K1Q8NHB7 308 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 NSUN6Q8TEA1 469 aaKnown RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 CENPIQ92674 756 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 CCDC120Q96HB5 630 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 MAGEB10Q96LZ2 347 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 CEP41Q9BYV8 373 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 SMURF2Q9HAU4 748 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 TNFRSF12AQ9NP84 129 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 ASAH2Q9NR71 780 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 TRMT13Q9NUP7 481 aaKnown RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 UCKL1Q9NWZ5 548 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 COMMD8Q9NX08 183 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 NUDT5Q9UKK9 219 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 YDJCA8MPS7 323 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 PLD2O14939 933 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 VPS4BO75351 444 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 SERPINI2O75830 405 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 IPO13O94829 963 aaKnown RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 PGK1P00558 417 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 MT-ND1P03886 318 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 HOXD8P13378 290 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 ARSAP15289 507 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 FSHRP23945 695 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 EFNA5P52803 228 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 CSNK2BP67870 215 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 SLC6A3Q01959 620 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 NFYCQ13952 458 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 DGCR6Q14129 220 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 ZBTB37Q5TC79 503 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 TXNDC11Q6PKC3 985 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 CDAN1Q8IWY9 1227 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 LINC00518Q8N0U6 118 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 EID3Q8N140 333 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 OR52E4Q8NGH9 312 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 NPLOC4Q8TAT6 608 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 SYTL5Q8TDW5 730 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-221ENST00000638141 P2RY11Q96G91 374 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 NEDD4LQ96PU5 975 aa11.85□□□□□ -0.51
CAPN3-221ENST00000638141 SLC30A2Q9BRI3 323 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms