RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.07□□□□□ -1.12
PNKP-226ENST00000636840 GPR150Q8NGU9 434 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 SLC37A2Q8TED4 501 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 TMEM159Q96B96 161 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 ZNF669Q96BR6 464 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 TMEM74Q96NL1 305 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 EBNA1BP2Q99848 306 aaKnown RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 TRIM51Q9BSJ1 452 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 CARD6Q9BX69 1037 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 C20orf96Q9NUD7 363 aaPredicted RBP8.07□□□□□ -1.12
PNKP-226ENST00000636840 POT1Q9NUX5 634 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 WHRNQ9P202 907 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 GNPTGQ9UJJ9 305 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 PCDHB1Q9Y5F3 818 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 FAM169AQ9Y6X4 670 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 U3KQA8 63 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 CACNA1AO00555 2505 aa8.07□□□□□ -1.12
PNKP-226ENST00000636840 RP1P56715 2156 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 PPM1DO15297 605 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 EIF3HO15372 352 aaKnown RBP eCLIP8.06□□□□□ -1.12
PNKP-226ENST00000636840 GPR39O43194 453 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 RAD51CO43502 376 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 CPNE6O95741 557 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 APOA4P06727 396 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 OGNP20774 298 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 SLC19A1P41440 591 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 MAGEA3P43357 314 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 CD151P48509 253 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 EPHA4P54764 986 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 OR1D5P58170 312 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 B4GALNT1Q00973 533 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 DHX9Q08211 1270 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 ILF2Q12905 390 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 TARDBPQ13148 414 aaKnown RBP eCLIP8.06□□□□□ -1.12
PNKP-226ENST00000636840 SQSTM1Q13501 440 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 NFE2L1Q14494 772 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 TMED2Q15363 201 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 SEPT7Q16181 437 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 AMZ1Q400G9 498 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 SPANXN3Q5MJ09 141 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 DNTTIP2Q5QJE6 756 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 CCNI2Q6ZMN8 369 aaPredicted RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 TMEM26Q6ZUK4 368 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 CENPUQ71F23 418 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 SPRED1Q7Z699 444 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 PALM2Q8IXS6 379 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 LSMEM2Q8N112 164 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 CLDN19Q8N6F1 224 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 ASZ1Q8WWH4 475 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 PATE1Q8WXA2 126 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 NCSTNQ92542 709 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 ELMO1Q92556 727 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 C12orf66Q96MD2 445 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 FERD3LQ96RJ6 166 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 FAM167BQ9BTA0 163 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 FOXP3Q9BZS1 431 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 TSPYL1Q9H0U9 437 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 DPH5Q9H2P9 285 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 UCK1Q9HA47 277 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 PPANQ9NQ55 473 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 INTS10Q9NVR2 710 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 FAM8A1Q9UBU6 413 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 ZC3H7BQ9UGR2 993 aaKnown RBP8.06□□□□□ -1.12
PNKP-226ENST00000636840 PSMD13Q9UNM6 376 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 ST14Q9Y5Y6 855 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 MRFAP1Q9Y605 127 aa8.06□□□□□ -1.12
PNKP-226ENST00000636840 LILRA5A6NI73 299 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 E5RI56 91 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 NTN3O00634 580 aaPredicted RBP8.05□□□□□ -1.12
PNKP-226ENST00000636840 FANCGO15287 622 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 B4GAT1O43505 415 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 DUX1O43812 170 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 OR1I1O60431 355 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 CSO75390 466 aaKnown RBP8.05□□□□□ -1.12
PNKP-226ENST00000636840 ESR1P03372 595 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 RPN2P04844 631 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 PRSS56P0CW18 603 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 CHRM3P20309 590 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 RPS3P23396 243 aaKnown RBP eCLIP8.05□□□□□ -1.12
PNKP-226ENST00000636840 CA5AP35218 305 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 ELK3P41970 407 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 RPL21P46778 160 aaKnown RBP8.05□□□□□ -1.12
PNKP-226ENST00000636840 ARCN1P48444 511 aaKnown RBP8.05□□□□□ -1.12
PNKP-226ENST00000636840 PLTPP55058 493 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 INHBCP55103 352 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 EIF3BP55884 814 aaKnown RBP8.05□□□□□ -1.12
PNKP-226ENST00000636840 PDIA2Q13087 525 aaKnown RBP8.05□□□□□ -1.12
PNKP-226ENST00000636840 EIF3IQ13347 325 aaKnown RBP8.05□□□□□ -1.12
PNKP-226ENST00000636840 TRA2AQ13595 282 aaKnown RBP eCLIP8.05□□□□□ -1.12
PNKP-226ENST00000636840 NR1D2Q14995 579 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 CLCA4Q14CN2 919 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 RPE65Q16518 533 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 ISXQ2M1V0 245 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 MAP9Q49MG5 647 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.05□□□□□ -1.12
PNKP-226ENST00000636840 CDCP2Q5VXM1 449 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 DUPD1Q68J44 220 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 UGT3A1Q6NUS8 523 aa8.05□□□□□ -1.12
PNKP-226ENST00000636840 ARMC6Q6NXE6 501 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms