RNA–Protein interactions for RNA: ENST00000628306.2

CAPNS1-216, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-216ENST00000628306 NSUN2Q08J23 767 aaKnown RBP eCLIP23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 FRG1Q14331 258 aaKnown RBP23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 LBRQ14739 615 aaKnown RBP23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 TTMPQ5BVD1 217 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 ZNF449Q6P9G9 518 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 ZSCAN1Q8NBB4 408 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 ZDHHC1Q8WTX9 485 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 CCDC74BQ96LY2 380 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 TEX101Q9BY14 249 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 ACSS3Q9H6R3 686 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 VPS37BQ9H9H4 285 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 CARS2Q9HA77 564 aaKnown RBP23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 BFARQ9NZS9 450 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 TAAR2Q9P1P5 351 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 LGALS13Q9UHV8 139 aa23.83■■□□□ 1.41
CAPNS1-216ENST00000628306 STMND1H3BQB6 276 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 CDH16O75309 829 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 AVILO75366 819 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 AGTP01019 485 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 HLA-DQB2P05538 268 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 CSF2RBP32927 897 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 BCL2L1Q07817 233 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 SLC10A7Q0GE19 358 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 CNGA3Q16281 694 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 CLPPQ16740 277 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 KLHL38Q2WGJ6 581 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 UBAP2Q5T6F2 1119 aaKnown RBP23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 ANKMY2Q8IV38 441 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 IGDCC3Q8IVU1 814 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 NAGSQ8N159 534 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 AGGF1Q8N302 714 aaeCLIP23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 OXNAD1Q96HP4 312 aaPredicted RBP23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 TAAR9Q96RI9 348 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 ARNT2Q9HBZ2 717 aa23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 ZC3H7BQ9UGR2 993 aaKnown RBP23.82■■□□□ 1.4
CAPNS1-216ENST00000628306 TTC24A2A3L6 582 aaPredicted RBP23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 PPM1DO15297 605 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 ALDH4A1P30038 563 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 ATP5DP30049 168 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 ADRA1AP35348 466 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 GRIA1P42261 906 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 LIMK2P53671 638 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 CDH17Q12864 832 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 SQSTM1Q13501 440 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 STEAP4Q687X5 459 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 HEATR4Q86WZ0 1026 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 TLCD1Q96CP7 247 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 PSKH2Q96QS6 385 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 CYTH2Q99418 400 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 ADNPQ9H2P0 1102 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 TRNAU1APQ9NX07 287 aaKnown RBP23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 TMEM9Q9P0T7 183 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 SEPT3Q9UH03 358 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 MOSPD1Q9UJG1 213 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 B3GALT1Q9Y5Z6 326 aa23.81■■□□□ 1.4
CAPNS1-216ENST00000628306 HTRA2O43464 458 aaPredicted RBP23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 CPP00450 1065 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 EPOP01588 193 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 LIFP15018 202 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 STX2P32856 288 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 UGT1A3P35503 534 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 ACOX1Q15067 660 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 NKAIN2Q5VXU1 208 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 RANBP10Q6VN20 620 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 STAMBPL1Q96FJ0 436 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 POLR1EQ9GZS1 481 aaKnown RBP23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 EURLQ9NYK6 297 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 SUFUQ9UMX1 484 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 CHMP2BQ9UQN3 213 aa23.8■■□□□ 1.4
CAPNS1-216ENST00000628306 RHPN2P1A8MT19 583 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 RGS16O15492 202 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 THRAP10827 490 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 CR2P20023 1033 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 LHCGRP22888 699 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 SSTR1P30872 391 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 GPR3P46089 330 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 PTPRRQ15256 657 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 TMEM164Q5U3C3 297 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 ARRDC2Q8TBH0 407 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 NUS1Q96E22 293 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 DHRS4Q9BTZ2 278 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 CINPQ9BW66 212 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 GSDMCQ9BYG8 508 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 SPRY4Q9C004 299 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 IL22Q9GZX6 179 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 CDH19Q9H159 772 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 EPN3Q9H201 632 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 SUDS3Q9H7L9 328 aaPredicted RBP23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 PLEKHM1Q9Y4G2 1056 aa23.79■■□□□ 1.4
CAPNS1-216ENST00000628306 IGHV1OR21-1A0A087WYE8 117 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 BANF1O75531 89 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 PGAM1P18669 254 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 POLD2P49005 469 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 SCNN1BP51168 640 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 AP1S1P61966 158 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 POLR2LP62875 67 aaKnown RBP23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 CDK3Q00526 305 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 CTBSQ01459 385 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 TUBB8Q3ZCM7 444 aa23.78■■□□□ 1.4
CAPNS1-216ENST00000628306 RALGPS1Q5JS13 557 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms