RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 CA9Q16790 459 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 DCST1Q5T197 706 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 ARL10Q8N8L6 244 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 PTPN18Q99952 460 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 GATA5Q9BWX5 397 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 PIGUQ9H490 435 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 SSU72Q9NP77 194 aaKnown RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 PNPLA8Q9NP80 782 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 DMAC2Q9NW81 257 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 RAPGEFL1Q9UHV5 662 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 NDRG2Q9UN36 371 aaKnown RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 MRC1P22897 1456 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 IGKV6D-41A0A0C4DH26 115 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 METTL18O95568 372 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 ENPEPQ07075 957 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 PCDH1Q08174 1060 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 HSPB3Q12988 150 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 AKIRIN2Q53H80 203 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 FAM131AQ6UXB0 335 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 SLCO6A1Q86UG4 719 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 FSTL5Q8N475 847 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 ZMIZ2Q8NF64 920 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 DBF4BQ8NFT6 615 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 TRNT1Q96Q11 434 aaKnown RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 DTLQ9NZJ0 730 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 IFT80Q9P2H3 777 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 FAM149AA5PLN7 773 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 PIP5K1BO14986 540 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 SCAMP1O15126 338 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 SLC7A4O43246 635 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 C8GP07360 202 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 TGFBR2P37173 567 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 POU5F1Q01860 360 aaKnown RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 ANKRD46Q86W74 232 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 GPR65Q8IYL9 337 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 KREMEN2Q8NCW0 462 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 MCFD2Q8NI22 146 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 SCAMP5Q8TAC9 235 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 CCDC162PA2VCL2 907 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 RGS10O43665 173 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 MT-ND1P03886 318 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 INHAP05111 366 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 VITQ6UXI7 678 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 C7orf61Q8IZ16 206 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 ZCCHC10Q8TBK6 192 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 TMEM109Q9BVC6 243 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 UNC93B1Q9H1C4 597 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 EIF2B3Q9NR50 452 aaKnown RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 POLR3BQ9NW08 1133 aaPredicted RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 IGSF9Q9P2J2 1179 aa12.66□□□□□ -0.38
SCN8A-209ENST00000627620 GNEQ9Y223 722 aaKnown RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 OAS3Q9Y6K5 1087 aaKnown RBP12.66□□□□□ -0.38
SCN8A-209ENST00000627620 LOC110117498-PIK3R3F6TDL0 507 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 OGNP20774 298 aaKnown RBP12.65□□□□□ -0.38
SCN8A-209ENST00000627620 MAT2AP31153 395 aaKnown RBP12.65□□□□□ -0.38
SCN8A-209ENST00000627620 TMEM63BQ5T3F8 832 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 SH3PXD2AQ5TCZ1 1133 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.65□□□□□ -0.38
SCN8A-209ENST00000627620 FAM92BQ6ZTR7 304 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 FITM2Q8N6M3 262 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 TTYH3Q9C0H2 523 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 TPK1Q9H3S4 243 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 ING4Q9UNL4 249 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 C9IYK1 514 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 SLC31A1O15431 190 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 KERAO60938 352 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 VNN1O95497 513 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 THRBP10828 461 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 S100GP29377 79 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 NSG1P42857 185 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 ARFIP1P53367 373 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 GJA9P57773 515 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 PRKCZQ05513 592 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 BNIP1Q12981 228 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 TIGD5Q53EQ6 642 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 ATP6V1C2Q8NEY4 427 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 SLC38A4Q969I6 547 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 ABCB8Q9NUT2 735 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 CNTN6Q9UQ52 1028 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 HMGB3O15347 200 aaKnown RBP12.65□□□□□ -0.38
SCN8A-209ENST00000627620 CHST10O43529 356 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 TCEA3O75764 348 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 SCELO95171 688 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 CD247P20963 164 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.65□□□□□ -0.38
SCN8A-209ENST00000627620 C6orf52Q5T4I8 152 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 ATCAYQ86WG3 371 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 TDRPQ86YL5 185 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 ESAMQ96AP7 390 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 FAXDC2Q96IV6 333 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 CACNG4Q9UBN1 327 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 CKLFQ9UBR5 152 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 FAM25EA8MYX2 175 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 CAPN15O75808 1086 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 PRDX6P30041 224 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 IDH3AP50213 366 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 PNLIPRP1P54315 467 aa12.65□□□□□ -0.38
SCN8A-209ENST00000627620 SUZ12Q15022 739 aaKnown RBP12.65□□□□□ -0.38
SCN8A-209ENST00000627620 RBM18Q96H35 190 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms