RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 NENFQ9UMX5 172 aa3.11□□□□□ -1.91
VBP1-204ENST00000625964 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.11□□□□□ -1.91
VBP1-204ENST00000625964 OR2M5A3KFT3 312 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 PTGES3LE9PB15 166 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 ZG16O60844 167 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 ZBED4O75132 1171 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 PTP4A3O75365 173 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 TBX6O95947 436 aaPredicted RBP3.1□□□□□ -1.91
VBP1-204ENST00000625964 GH2P01242 217 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 MSH3P20585 1137 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 CAPN3P20807 821 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 HOXA13P31271 388 aaPredicted RBP3.1□□□□□ -1.91
VBP1-204ENST00000625964 GARSP41250 739 aaKnown RBP3.1□□□□□ -1.91
VBP1-204ENST00000625964 TECRLQ5HYJ1 363 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 PTOV1Q86YD1 416 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 ADGRF2Q8IZF7 708 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 WDSUB1Q8N9V3 476 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 ZNF473Q8WTR7 871 aaKnown RBP3.1□□□□□ -1.91
VBP1-204ENST00000625964 SMPDL3BQ92485 455 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 SEMA4DQ92854 862 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 TIGD1Q96MW7 591 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 PSD2Q9BQI7 771 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 CHCHD6Q9BRQ6 235 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 ZNF696Q9H7X3 374 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 MIOSQ9NXC5 875 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 TRMT1Q9NXH9 659 aaKnown RBP3.1□□□□□ -1.91
VBP1-204ENST00000625964 DDX43Q9NXZ2 648 aaKnown RBP3.1□□□□□ -1.91
VBP1-204ENST00000625964 ZNF624Q9P2J8 865 aaPredicted RBP3.1□□□□□ -1.91
VBP1-204ENST00000625964 PNMA2Q9UL42 364 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 LAS1LQ9Y4W2 734 aaKnown RBP3.1□□□□□ -1.91
VBP1-204ENST00000625964 ITIH6Q6UXX5 1313 aa3.1□□□□□ -1.91
VBP1-204ENST00000625964 DUXAA6NLW8 204 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 SMIM1B2RUZ4 78 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 BLOC1S5-TXNDC5H3BN57 136 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 CLIC2O15247 247 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 EDIL3O43854 480 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 TUBBP07437 444 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 RNF224P0DH78 156 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 SELLP14151 372 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 GNAZP19086 355 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 NMBRP28336 390 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 NR2C2P49116 596 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 ATP12AP54707 1039 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 TUBB4BP68371 445 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 KCNC3Q14003 757 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 ZNF876PQ49A33 203 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 C4orf50Q6ZRC1 276 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 C1orf131Q8NDD1 294 aaKnown RBP3.09□□□□□ -1.91
VBP1-204ENST00000625964 F2RL3Q96RI0 385 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 DENND2DQ9H6A0 471 aaPredicted RBP3.09□□□□□ -1.91
VBP1-204ENST00000625964 ZBTB20Q9HC78 741 aaPredicted RBP3.09□□□□□ -1.91
VBP1-204ENST00000625964 SLC52A3Q9NQ40 469 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 PCDHGA5Q9Y5G8 931 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 TAF1P21675 1872 aa3.09□□□□□ -1.91
VBP1-204ENST00000625964 CDRT15L2A8MXV6 281 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 VILLO15195 856 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 NDUFS4O43181 175 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 PCDH7O60245 1069 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 GCNT3O95395 438 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 CKMT2P17540 419 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 PSMC4P43686 418 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 RXRGP48443 463 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 MFAP4P55083 255 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 DLG2Q15700 870 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 RBMS3Q6XE24 437 aaKnown RBP3.09□□□□□ -1.92
VBP1-204ENST00000625964 GALNT5Q7Z7M9 940 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 TRPT1Q86TN4 253 aaKnown RBP3.09□□□□□ -1.92
VBP1-204ENST00000625964 FAM76AQ8TAV0 307 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 FCAMRQ8WWV6 532 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 SAT2Q96F10 170 aaPredicted RBP3.09□□□□□ -1.92
VBP1-204ENST00000625964 FSD1Q9BTV5 496 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 MAK16Q9BXY0 300 aaKnown RBP3.09□□□□□ -1.92
VBP1-204ENST00000625964 HRH4Q9H3N8 390 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 SYNCQ9H7C4 482 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 MBNL1Q9NR56 388 aaKnown RBP3.09□□□□□ -1.92
VBP1-204ENST00000625964 TAS2R14Q9NYV8 317 aa3.09□□□□□ -1.92
VBP1-204ENST00000625964 A0A0G2JLW4 131 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 A0A1W2PR77 199 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 LRRC72A6NJI9 287 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 SH3BP5O60239 455 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 GPR137BO60478 399 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 DOK2O60496 412 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 WDHD1O75717 1129 aaPredicted RBP3.08□□□□□ -1.92
VBP1-204ENST00000625964 RSL1D1O76021 490 aaKnown RBP3.08□□□□□ -1.92
VBP1-204ENST00000625964 TSHBP01222 138 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 APOHP02749 345 aaPredicted RBP3.08□□□□□ -1.92
VBP1-204ENST00000625964 PATE4P0C8F1 98 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 MMP9P14780 707 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 EPHA2P29317 976 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 DRG2P55039 364 aaKnown RBP3.08□□□□□ -1.92
VBP1-204ENST00000625964 SNRPEP62304 92 aaKnown RBP3.08□□□□□ -1.92
VBP1-204ENST00000625964 MRPS5P82675 430 aaKnown RBP3.08□□□□□ -1.92
VBP1-204ENST00000625964 GAGE2BQ13066 116 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 PLA2G7Q13093 441 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 MFAP5Q13361 173 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 KRT33BQ14525 404 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 GAGE2EQ4V326 116 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 ZC2HC1CQ53FD0 456 aaPredicted RBP3.08□□□□□ -1.92
VBP1-204ENST00000625964 ALS2CLQ60I27 953 aa3.08□□□□□ -1.92
VBP1-204ENST00000625964 ADALQ6DHV7 355 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms