RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	ANKH	Q9HCJ1	492 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	RB1	P06400	928 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	PIM1	P11309	404 aa	Predicted RBP	13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	PRKCH	P24723	683 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	LRP8	Q14114	963 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	ALG10	Q5BKT4	473 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	RALGPS2	Q86X27	583 aa	Predicted RBP	13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	ARL14EP	Q8N8R7	260 aa	Predicted RBP	13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	AZIN2	Q96A70	460 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	ACP6	Q9NPH0	428 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	KLRF1	Q9NZS2	232 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	RAPGEFL1	Q9UHV5	662 aa		13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	FCF1	Q9Y324	198 aa	Known RBP	13.72	□□□□□ -0.21
NRXN1-222	ENST00000625672	MICAL3	Q7RTP6	2002 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	ARL5C	A6NH57	179 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	GPM6B	Q13491	265 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	ELOA3B	Q3SY89	546 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	ELOA3	Q8NG57	546 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	NAT14	Q8WUY8	206 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	BRF2	Q9HAW0	419 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	TCF7L1	Q9HCS4	588 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	TAS2R14	Q9NYV8	317 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	GOLGA4	Q13439	2230 aa	Known RBP	13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672		A8MUI8	341 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	STK16	O75716	305 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	CD2	P06729	351 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	HCAR3	P49019	387 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	AIF1	P55008	147 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	EIPR1	Q53HC9	387 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	NPAS4	Q8IUM7	802 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	DEFB119	Q8N690	84 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	LRRC52	Q8N7C0	313 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	PLA2G15	Q8NCC3	412 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	ACMSD	Q8TDX5	336 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	STYX	Q8WUJ0	223 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	MAP2	P11137	1827 aa	Known RBP	13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	NRP2	O60462	931 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	HEPACAM	Q14CZ8	416 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	LRRC73	Q5JTD7	316 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	RASSF5	Q8WWW0	418 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	KIAA1143	Q96AT1	154 aa	Predicted RBP	13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	LGR4	Q9BXB1	951 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	TMLHE	Q9NVH6	421 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	PADI3	Q9ULW8	664 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	TSPAN1	O60635	241 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	IFNW1	P05000	195 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	GTF2H2	Q13888	395 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	SLC9A4	Q6AI14	798 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	GTF2H2C	Q6P1K8	395 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	ZNF627	Q7L945	461 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	CUZD1	Q86UP6	607 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	CEP97	Q8IW35	865 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	PPM1M	Q96MI6	270 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	IFT27	Q9BW83	186 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	IL1RAP	Q9NPH3	570 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	CDC14A	Q9UNH5	594 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	SORCS3	Q9UPU3	1222 aa		13.71	□□□□□ -0.21
NRXN1-222	ENST00000625672	TBX1	O43435	398 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	CXCR1	P25024	350 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	GRK5	P34947	590 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	CDH4	P55283	916 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	FPGS	Q05932	587 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	BNIP1	Q12981	228 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	FAM92B	Q6ZTR7	304 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	STK32A	Q8WU08	396 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	SLC35C1	Q96A29	364 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	RPL10L	Q96L21	214 aa	Known RBP	13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	ZNF717	Q9BY31	904 aa	Predicted RBP	13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	NOL11	Q9H8H0	719 aa	Known RBP	13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	GLOD4	Q9HC38	313 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	TMEM5	Q9Y2B1	443 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	NR2E1	Q9Y466	385 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	COL1A2	P08123	1366 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	FAM240B	A0A1B0GVZ2	78 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	OR14I1	A6ND48	311 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	SLC30A4	O14863	429 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	HDAC3	O15379	428 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	JMJD7	P0C870	316 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	PKM	P14618	531 aa	Known RBP	13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	IGFBP5	P24593	272 aa		13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	CIR1	Q86X95	450 aa	Predicted RBP	13.71	□□□□□ -0.22
NRXN1-222	ENST00000625672	CPNE3	O75131	537 aa	Known RBP	13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	ERBB2	P04626	1255 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	SLC25A25	Q6KCM7	469 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	OTOP3	Q7RTS5	596 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	EPS8L1	Q8TE68	723 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	BORCS8	Q96FH0	119 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	C8orf48	Q96LL4	319 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	C8orf4	Q9NR00	106 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	FKBP7	Q9Y680	259 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	GDI1	P31150	447 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	FSTL1	Q12841	308 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	PDSS1	Q5T2R2	415 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	ERICH5	Q6P6B1	374 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	TMPRSS9	Q7Z410	1059 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	ZBTB46	Q86UZ6	589 aa		13.7	□□□□□ -0.22
NRXN1-222	ENST00000625672	OR4K17	Q8NGC6	315 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms