RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 HIST3H2AQ7L7L0 130 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 MYPOPQ86VE0 399 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 GALNT13Q8IUC8 556 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 SMPDL3BQ92485 455 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 SEMA4DQ92854 862 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 ERP27Q96DN0 273 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 C7orf26Q96N11 449 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 ZNF599Q96NL3 588 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 TSPAN18Q96SJ8 248 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 ASCL2Q99929 193 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 SIX2Q9NPC8 291 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 TRMT1Q9NXH9 659 aaKnown RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 CLIC5Q9NZA1 410 aa3.99□□□□□ -1.77
BRCA1-229ENST00000621897 DBNLQ9UJU6 430 aaKnown RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 FBXO2Q9UK22 296 aaPredicted RBP3.99□□□□□ -1.77
BRCA1-229ENST00000621897 C15orf62A8K5M9 175 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 ERI2A8K979 691 aaKnown RBP3.98□□□□□ -1.77
BRCA1-229ENST00000621897 MAGEB17A8MXT2 336 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 PLOD2O00469 737 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 SCAMP1O15126 338 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 CLIC2O15247 247 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 EXTL3O43909 919 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 IGLV1-44P01699 117 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 RARGP13631 454 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 THOP1P52888 689 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 MPP1Q00013 466 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 CDC37Q16543 378 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-229ENST00000621897 MEP1AQ16819 746 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 KRT71Q3SY84 523 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 ZNF772Q68DY9 489 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-229ENST00000621897 ZNF790Q6PG37 636 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 TPRG1Q6ZUI0 275 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 ANKRD23Q86SG2 305 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 CRYBG2Q8N1P7 616 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 MAPK1IP1LQ8NDC0 245 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 PPHLN1Q8NEY8 458 aaKnown RBP3.98□□□□□ -1.77
BRCA1-229ENST00000621897 OR2T12Q8NG77 320 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 OR2A14Q96R47 310 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 MUC13Q9H3R2 512 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 CORO1CQ9ULV4 474 aaPredicted RBP3.98□□□□□ -1.77
BRCA1-229ENST00000621897 RABGAP1Q9Y3P9 1069 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 MMP24Q9Y5R2 645 aa3.98□□□□□ -1.77
BRCA1-229ENST00000621897 B4E171 279 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 CD4P01730 458 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 HSP90AB1P08238 724 aaKnown RBP3.97□□□□□ -1.77
BRCA1-229ENST00000621897 CEACAM1P13688 526 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 LIFP15018 202 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 CKMT2P17540 419 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 CDH2P19022 906 aaPredicted RBP3.97□□□□□ -1.77
BRCA1-229ENST00000621897 PSMA4P25789 261 aaKnown RBP3.97□□□□□ -1.77
BRCA1-229ENST00000621897 EPHA2P29317 976 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 TSPAN7P41732 249 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 GEMIN4P57678 1058 aaKnown RBP3.97□□□□□ -1.77
BRCA1-229ENST00000621897 PRKAA1Q13131 559 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 MFAP5Q13361 173 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 TMEM187Q14656 261 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 PCGF3Q3KNV8 242 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 KIAA1644Q3SXP7 199 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 ALDH1L2Q3SY69 923 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 FFAR4Q5NUL3 377 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 LCE3CQ5T5A8 94 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 JAKMIP3Q5VZ66 844 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 JADE1Q6IE81 842 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 SH2D5Q6ZV89 423 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 HACE1Q8IYU2 909 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 SKA1Q96BD8 255 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 MPP4Q96JB8 637 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 ART5Q96L15 291 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 PLK3Q9H4B4 646 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 SLA2Q9H6Q3 261 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 PAG1Q9NWQ8 432 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 C2orf42Q9NWW7 574 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 IRAK4Q9NWZ3 460 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 CACNG5Q9UF02 275 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 KCNJ14Q9UNX9 436 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 MTMR6Q9Y217 621 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 DISP3Q9P2K9 1392 aa3.97□□□□□ -1.77
BRCA1-229ENST00000621897 STK36Q9NRP7 1315 aa3.96□□□□□ -1.77
BRCA1-229ENST00000621897 A8MZ25 164 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 PSMD14O00487 310 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 NADKO95544 446 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-229ENST00000621897 HOXA13P31271 388 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-229ENST00000621897 PPP2R2BQ00005 443 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 ZSCAN23Q3MJ62 389 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 ZFP69Q49AA0 526 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 RARS2Q5T160 578 aaKnown RBP3.96□□□□□ -1.78
BRCA1-229ENST00000621897 C1QTNF12Q5T7M4 302 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 SNX30Q5VWJ9 437 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 KIAA0930Q6ICG6 404 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-229ENST00000621897 DENND5BQ6ZUT9 1274 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 TTC30BQ8N4P2 665 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 SLC47A1Q96FL8 570 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 NUDCD1Q96RS6 583 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 SERINC2Q96SA4 455 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 RHNO1Q9BSD3 238 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 HGH1Q9BTY7 390 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 ITPAQ9BY32 194 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 MIOSQ9NXC5 875 aa3.96□□□□□ -1.78
BRCA1-229ENST00000621897 CWC25Q9NXE8 425 aaPredicted RBP3.96□□□□□ -1.78
BRCA1-229ENST00000621897 ORC3Q9UBD5 711 aaPredicted RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms