RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 KRT71Q3SY84 523 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 PYCR3Q53H96 274 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 ALG1LQ6GMV1 187 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 INO80CQ6PI98 192 aaPredicted RBP15.9■□□□□ 0.14
CD40-207ENST00000620709 ZNF765Q7L2R6 523 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 LINC00523Q86TU6 105 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 ZFAND4Q86XD8 727 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 ZNF761Q86XN6 746 aaPredicted RBP15.9■□□□□ 0.14
CD40-207ENST00000620709 PALM2Q8IXS6 379 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 ZNF843Q8N446 348 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 TMEM159Q96B96 161 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 ZBTB9Q96C00 473 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 OXNAD1Q96HP4 312 aaPredicted RBP15.9■□□□□ 0.14
CD40-207ENST00000620709 CCDC77Q9BR77 488 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 WDR83Q9BRX9 315 aaKnown RBP15.9■□□□□ 0.14
CD40-207ENST00000620709 TMEM109Q9BVC6 243 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 PKD2L2Q9NZM6 624 aa15.9■□□□□ 0.14
CD40-207ENST00000620709 SPAG6O75602 509 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 CD1CP29017 333 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 OAS2P29728 719 aaKnown RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 GRIA1P42261 906 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 RPL26P61254 145 aaKnown RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 SRSF6Q13247 344 aaKnown RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 MPP3Q13368 585 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 SPARCL1Q14515 664 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 PCSK7Q16549 785 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 CHST15Q7LFX5 561 aaPredicted RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 C17orf82Q86X59 251 aaPredicted RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 AHCYL2Q96HN2 611 aaKnown RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 CCDC74BQ96LY2 380 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 ADGRE3Q9BY15 652 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 ROPN1BQ9BZX4 212 aaPredicted RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 FAM83DQ9H4H8 585 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 ROPN1Q9HAT0 212 aaPredicted RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 KCNK4Q9NYG8 393 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 FOXJ2Q9P0K8 574 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 RPL26L1Q9UNX3 145 aaKnown RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 OAS3Q9Y6K5 1087 aaKnown RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 SCN8AQ9UQD0 1980 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 NVLO15381 856 aaKnown RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 SNX2O60749 519 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 MMP2P08253 660 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 CCL4P13236 92 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 SPINT3P49223 89 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 MANEAQ5SRI9 462 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 ZNF574Q6ZN55 896 aaPredicted RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 ZNF438Q7Z4V0 828 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 ZNF605Q86T29 641 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 VASH2Q86V25 355 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 AGGF1Q8N302 714 aaeCLIP15.89■□□□□ 0.13
CD40-207ENST00000620709 SPATA22Q8NHS9 363 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 JPH3Q8WXH2 748 aaPredicted RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 IMP4Q96G21 291 aaKnown RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 SCARF2Q96GP6 870 aaPredicted RBP15.89■□□□□ 0.13
CD40-207ENST00000620709 SIGLEC10Q96LC7 697 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 TBL1YQ9BQ87 522 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 TMBIM4Q9HC24 238 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 CASS4Q9NQ75 786 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 UBP1Q9NZI7 540 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 KCNK6Q9Y257 313 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 PCDHB11Q9Y5F2 797 aa15.89■□□□□ 0.13
CD40-207ENST00000620709 IGHV5-10-1A0A0J9YXX1 117 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 SDR42E2A6NKP2 422 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 ANKRD66B4E2M5 251 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 RASGRF2O14827 1237 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 MT-CYBP00156 380 aaPredicted RBP15.88■□□□□ 0.13
CD40-207ENST00000620709 GSTA2P09210 222 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 PIRTP0C851 137 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 LIPCP11150 499 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 ACP5P13686 325 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 GPR3P46089 330 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 SESN2P58004 480 aaPredicted RBP15.88■□□□□ 0.13
CD40-207ENST00000620709 GPX6P59796 221 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 NFATC2Q13469 925 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 SNAP47Q5SQN1 464 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 TMEM164Q5U3C3 297 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 CAPN12Q6ZSI9 719 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 C3orf62Q6ZUJ4 267 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 LYSMD3Q7Z3D4 306 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 NLRP8Q86W28 1048 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 DNAAF3Q8N9W5 541 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 OR52K1Q8NGK4 314 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 COX14Q96I36 57 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 SLC38A3Q99624 504 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 EBNA1BP2Q99848 306 aaKnown RBP15.88■□□□□ 0.13
CD40-207ENST00000620709 FSD1LQ9BXM9 530 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 ZC3H7BQ9UGR2 993 aaKnown RBP15.88■□□□□ 0.13
CD40-207ENST00000620709 PCYT1BQ9Y5K3 369 aaPredicted RBP15.88■□□□□ 0.13
CD40-207ENST00000620709 MAD1L1Q9Y6D9 718 aa15.88■□□□□ 0.13
CD40-207ENST00000620709 CFAP46Q8IYW2 2715 aa15.87■□□□□ 0.13
CD40-207ENST00000620709 FADS2P1A8MWK0 482 aa15.87■□□□□ 0.13
CD40-207ENST00000620709 ZIC2O95409 532 aaPredicted RBP15.87■□□□□ 0.13
CD40-207ENST00000620709 EML2O95834 649 aa15.87■□□□□ 0.13
CD40-207ENST00000620709 MGAT1P26572 445 aa15.87■□□□□ 0.13
CD40-207ENST00000620709 SSTR1P30872 391 aa15.87■□□□□ 0.13
CD40-207ENST00000620709 MAPK9P45984 424 aa15.87■□□□□ 0.13
CD40-207ENST00000620709 CDH17Q12864 832 aa15.87■□□□□ 0.13
CD40-207ENST00000620709 ZNF648Q5T619 568 aaPredicted RBP15.87■□□□□ 0.13
CD40-207ENST00000620709 IGDCC3Q8IVU1 814 aa15.87■□□□□ 0.13
CD40-207ENST00000620709 IPMKQ8NFU5 416 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms