RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 CNTN5O94779 1100 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TNNC2P02585 160 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 GJB1P08034 283 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TPSB2P20231 275 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 ALDH3A2P51648 485 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 PIGFQ07326 219 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 PRKAA1Q13131 559 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 CAPSQ13938 189 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TPSAB1Q15661 275 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 IMPG1Q17R60 797 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 ALFQ53S48 1182 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 FAM209BQ5JX69 171 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 BSPRYQ5W0U4 402 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 ANKS3Q6ZW76 656 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TLK2Q86UE8 772 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 GPAT4Q86UL3 456 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 CDKL3Q8IVW4 592 aaPredicted RBP10.25□□□□□ -0.77
VPS11-207ENST00000620429 LRRC71Q8N4P6 559 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 TXNDC5Q8NBS9 432 aaKnown RBP10.25□□□□□ -0.77
VPS11-207ENST00000620429 KCT2Q8NC54 265 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 ZMIZ2Q8NF64 920 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 OR52H1Q8NGJ2 320 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 CDC26Q8NHZ8 85 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 COPS5Q92905 334 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 AURKBQ96GD4 344 aaPredicted RBP10.25□□□□□ -0.77
VPS11-207ENST00000620429 PPP1R36Q96LQ0 422 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 GATA5Q9BWX5 397 aaPredicted RBP10.25□□□□□ -0.77
VPS11-207ENST00000620429 TMEM134Q9H6X4 195 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 SP110Q9HB58 689 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 IFT46Q9NQC8 304 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 SLC35C2Q9NQQ7 365 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 CHRAC1Q9NRG0 131 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 EMC3Q9P0I2 261 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 GMPR2Q9P2T1 348 aaKnown RBP10.25□□□□□ -0.77
VPS11-207ENST00000620429 KLHL21Q9UJP4 597 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 KCNH4Q9UQ05 1017 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 STON1Q9Y6Q2 735 aa10.25□□□□□ -0.77
VPS11-207ENST00000620429 IGKV6D-21A0A0A0MT36 114 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 OR6C70A6NIJ9 312 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 C2CD4BA6NLJ0 364 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 H3BQ06 376 aaPredicted RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 C1QBP02746 253 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 FTH1P02794 183 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 HSD17B1P14061 328 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 F8A1P23610 371 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 OXTRP30559 389 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 SLC15A1P46059 708 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 STAT5BP51692 787 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 SLC7A2P52569 658 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 SESN2P58004 480 aaPredicted RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 PTPN11Q06124 597 aaPredicted RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 GRM1Q13255 1194 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 HSDL1Q3SXM5 330 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 ZNF667Q5HYK9 610 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 HABP4Q5JVS0 413 aaKnown RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 TMEM81Q6P7N7 255 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 EFL1Q7Z2Z2 1120 aaKnown RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 SPPL2CQ8IUH8 684 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 RASGRP3Q8IV61 690 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 BBS7Q8IWZ6 715 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 GPALPP1Q8IXQ4 340 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 TMEM130Q8N3G9 435 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 ANKRD52Q8NB46 1076 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 OR8K5Q8NH50 307 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 MCOLN3Q8TDD5 553 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 TRAPPC12Q8WVT3 735 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 DNAJA4Q8WW22 397 aaPredicted RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 ZNF566Q969W8 418 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 CDCA5Q96FF9 252 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 PIWIL1Q96J94 861 aaKnown RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 TBCBQ99426 244 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 DCSTAMPQ9H295 470 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 KAT8Q9H7Z6 458 aaKnown RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 CD93Q9NPY3 652 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 INTS6Q9UL03 887 aaKnown RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 TBC1D24Q9ULP9 559 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 SNX6Q9UNH7 406 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 MAPRE3Q9UPY8 281 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 SNX8Q9Y5X2 465 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 SLC1A7O00341 560 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 MRASO14807 208 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 OGTO15294 1046 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 SLC22A5O76082 557 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 LDLRP01130 860 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 CLEC2LP0C7M8 214 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 THRBP10828 461 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 KELP23276 732 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 EDNRBP24530 442 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 CPT1AP50416 773 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 AAK1Q2M2I8 961 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 FBXO43Q4G163 708 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 TYW3Q6IPR3 259 aaKnown RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 DENND5AQ6IQ26 1287 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 TBPL2Q6SJ96 375 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 ZBTB44Q8NCP5 570 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 HMGCLL1Q8TB92 370 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 PTP4A1Q93096 173 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 OR2A14Q96R47 310 aa10.24□□□□□ -0.77
VPS11-207ENST00000620429 INTS7Q9NVH2 962 aaKnown RBP10.24□□□□□ -0.77
VPS11-207ENST00000620429 ABCD2Q9UBJ2 740 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms