RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 BIRC7Q96CA5 298 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ISOC1Q96CN7 298 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 LINGO1Q96FE5 620 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CENPNQ96H22 339 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SEPT5Q99719 369 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 HOPXQ9BPY8 73 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 NPLQ9BXD5 320 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SEZ6LQ9BYH1 1024 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 KRTAP9-9Q9BYP9 154 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 KRTAP9-8Q9BYQ0 159 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 KRTAP9-4Q9BYQ2 154 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 NANOGQ9H9S0 305 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CLK4Q9HAZ1 481 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MRPL40Q9NQ50 206 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SLC6A13Q9NSD5 602 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 INTS10Q9NVR2 710 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RIMKLBQ9ULI2 386 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TMCO1Q9UM00 188 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 FNDC3AQ9Y2H6 1198 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CCL27Q9Y4X3 112 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MKI67P46013 3256 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CASP8AP2Q9UKL3 1982 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 STX16O14662 325 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 INSIG1O15503 277 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ACSL4O60488 711 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TSPAN3O60637 253 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SERPINF2P08697 491 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 CNPP09543 421 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PKMP14618 531 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ELK4P28324 431 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MC4RP32245 332 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SLC11A1P49279 550 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ENTPD1P49961 510 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ZNF157P51786 506 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 DGKQP52824 942 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 IST1P53990 364 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MLLT10P55197 1068 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TUBA4AP68366 448 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ADARB1P78563 741 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PLIN5Q00G26 463 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 FOXM1Q08050 763 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TRAF3Q13114 568 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MAP7Q14244 749 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MYBPC3Q14896 1274 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TAF1AQ15573 450 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TGFBIQ15582 683 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 NFE2Q16621 373 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 LINC01559Q495D7 138 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TMEM259Q4ZIN3 620 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RFTN2Q52LD8 501 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PDCD4Q53EL6 469 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SLC44A4Q53GD3 710 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ANKS6Q68DC2 871 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 LAIR2Q6ISS4 152 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 KRT80Q6KB66 452 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TMEM214Q6NUQ4 689 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 DHRS4L2Q6PKH6 230 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 AFTPHQ6ULP2 937 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SBSNQ6UWP8 590 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SLC24A5Q71RS6 500 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 LPCAT2Q7L5N7 544 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 GLT6D1Q7Z4J2 308 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ITIH5Q86UX2 942 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 GPR180Q86V85 440 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ZFAND4Q86XD8 727 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 DENND1CQ8IV53 801 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 MSRB3Q8IXL7 192 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ALDH16A1Q8IZ83 802 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PACRGLQ8N7B6 248 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PDPRQ8NCN5 879 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 FAM81AQ8TBF8 368 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 STAG3L4Q8TBR4 150 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RNF217Q8TC41 542 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 WFDC5Q8TCV5 224 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 C12orf43Q96C57 262 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RMDN1Q96DB5 314 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 HSPBAP1Q96EW2 488 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PPM1MQ96MI6 270 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ASB2Q96Q27 587 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 KCTD14Q9BQ13 255 aaPredicted RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 HGH1Q9BTY7 390 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 SPON2Q9BUD6 331 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 BOCQ9BWV1 1114 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 VN1R3Q9BXE9 311 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TRIM54Q9BYV2 358 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 P2RY12Q9H244 342 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 RRAGCQ9HB90 399 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TLR8Q9NR97 1041 aaKnown RBP4.26□□□□□ -1.73
SEC22B-202ENST00000618538 GKN1Q9NS71 199 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 ELOVL2Q9NXB9 296 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 PGPEP1Q9NXJ5 209 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 TAS2R13Q9NYV9 303 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 LHX3Q9UBR4 397 aa4.26□□□□□ -1.73
SEC22B-202ENST00000618538 COL4A6Q14031 1691 aa4.25□□□□□ -1.73
SEC22B-202ENST00000618538 A0A1W2PPW3 197 aa4.25□□□□□ -1.73
SEC22B-202ENST00000618538 MANSC4A6NHS7 340 aaPredicted RBP4.25□□□□□ -1.73
SEC22B-202ENST00000618538 TRIM64BA6NI03 449 aa4.25□□□□□ -1.73
SEC22B-202ENST00000618538 CCDC154A6NI56 674 aa4.25□□□□□ -1.73
SEC22B-202ENST00000618538 SLC38A8A6NNN8 435 aa4.25□□□□□ -1.73
SEC22B-202ENST00000618538 F5H5T6 163 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms