RNA–Protein interactions for RNA: ENST00000618533.4

RPP40-207, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-207ENST00000618533 SFTPA2Q8IWL1 248 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 TRIM48Q8IWZ4 208 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 GFM1Q96RP9 751 aaKnown RBP15.31■□□□□ 0.04
RPP40-207ENST00000618533 SLC38A3Q99624 504 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 RABGEF1Q9UJ41 708 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 KLK13Q9UKR3 277 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 FAM169AQ9Y6X4 670 aa15.31■□□□□ 0.04
RPP40-207ENST00000618533 ZCWPW2A0A1B0GU75 182 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 LILRA5A6NI73 299 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 D6RAR5 112 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 NDUFS3O75489 264 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 VIPP01282 170 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 RPLP0P05388 317 aaKnown RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 SLC35G4P0C7Q5 338 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 BRAFP15056 766 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 RPL10P27635 214 aaKnown RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 PBLDP30039 288 aaPredicted RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 CD151P48509 253 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 ADARP55265 1226 aaKnown RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 CAV1Q03135 178 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 DHX9Q08211 1270 aaKnown RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 THOC5Q13769 683 aaKnown RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 LONRF1Q17RB8 773 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 SPANXN3Q5MJ09 141 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 DUPD1Q68J44 220 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 NEPROQ6NW34 567 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 CES3Q6UWW8 571 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 CLDN19Q8N6F1 224 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 OTUD6BQ8N6M0 293 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.3■□□□□ 0.04
RPP40-207ENST00000618533 OR10G6Q8NH81 332 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 ZFPM2Q8WW38 1151 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 CXorf40BQ96DE9 158 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 PANX3Q96QZ0 392 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 EBNA1BP2Q99848 306 aaKnown RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 CARD6Q9BX69 1037 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 TRIM31Q9BZY9 425 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 PHACTR1Q9C0D0 580 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 COG4Q9H9E3 785 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 INTS10Q9NVR2 710 aaKnown RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 KCNK4Q9NYG8 393 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 ZNF624Q9P2J8 865 aaPredicted RBP15.3■□□□□ 0.04
RPP40-207ENST00000618533 GNPTGQ9UJJ9 305 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 SNX24Q9Y343 169 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 PCDHB1Q9Y5F3 818 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 HEBP2Q9Y5Z4 205 aa15.3■□□□□ 0.04
RPP40-207ENST00000618533 A0A1W2PQM1 296 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 H3BMM5 538 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 KPNA5O15131 536 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 CPNE6O95741 557 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 TOP3BO95985 862 aaKnown RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 SLC19A1P41440 591 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 DRG2P55039 364 aaKnown RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 CCL7P80098 99 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 SEMA3AQ14563 771 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 SEPT7Q16181 437 aaKnown RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 ISXQ2M1V0 245 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 BBS9Q3SYG4 887 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 ZNF658BQ4V348 819 aaPredicted RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 C8orf74Q6P047 294 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 FAM83HQ6ZRV2 1179 aaPredicted RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 CILP2Q8IUL8 1156 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 CFAP206Q8IYR0 622 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 AGGF1Q8N302 714 aaeCLIP15.29■□□□□ 0.04
RPP40-207ENST00000618533 CCDC97Q96F63 343 aaPredicted RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 TMEM74Q96NL1 305 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 FCRL3Q96P31 734 aaPredicted RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 FAM167BQ9BTA0 163 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 SCHIP1Q9P0W5 487 aaPredicted RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 MARCH4Q9P2E8 410 aaPredicted RBP15.29■□□□□ 0.04
RPP40-207ENST00000618533 PRSS21Q9Y6M0 314 aa15.29■□□□□ 0.04
RPP40-207ENST00000618533 TRBV23OR9-2A0A075B6M9 112 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 IGHV1OR21-1A0A087WYE8 117 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 CTAGE15A4D2H0 777 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 E7ESA3 106 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 TP73O15350 636 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 EIF3HO15372 352 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPP40-207ENST00000618533 B4GAT1O43505 415 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 DUX1O43812 170 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 OR1I1O60431 355 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 CSO75390 466 aaKnown RBP15.28■□□□□ 0.04
RPP40-207ENST00000618533 ESR1P03372 595 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 CTAGE8P0CG41 777 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 MTHFD1P11586 935 aaKnown RBP15.28■□□□□ 0.04
RPP40-207ENST00000618533 NDUFS1P28331 727 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 ALDH4A1P30038 563 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 CCKBRP32239 447 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 TARDBPQ13148 414 aaKnown RBP eCLIP15.28■□□□□ 0.04
RPP40-207ENST00000618533 CRYMQ14894 314 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 CLCA4Q14CN2 919 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 RPE65Q16518 533 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 CAPRIN2Q6IMN6 1127 aaKnown RBP15.28■□□□□ 0.04
RPP40-207ENST00000618533 TMEM26Q6ZUK4 368 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 CTAGE6Q86UF2 777 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 CTAGE4Q8IX94 777 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 MMGT1Q8N4V1 131 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 Q8N9G6 341 aaPredicted RBP15.28■□□□□ 0.04
RPP40-207ENST00000618533 ELMO1Q92556 727 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 NRSN2Q9GZP1 204 aa15.28■□□□□ 0.04
RPP40-207ENST00000618533 P2RY12Q9H244 342 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms