RNA–Protein interactions for RNA: ENST00000614678.1

CPNE3-208, Transcript of copine 3, humanhuman

TSL 1 (best)

Gene CPNE3, Length 4,201 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-208ENST00000614678 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 TSTD2Q5T7W7 516 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 CAPN12Q6ZSI9 719 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 ZFAND4Q86XD8 727 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 VPS35Q96QK1 796 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 ZNF462Q96JM2 2506 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 TENM4Q6N022 2769 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 PGRMC1O00264 195 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 NUDT21O43809 227 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 KIF5CO60282 957 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 PVRP15151 417 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 ZNF28P17035 718 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SNRPNP63162 240 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 UBE2IP63279 158 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 CDH17Q12864 832 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 CUL1Q13616 776 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 COLEC12Q5KU26 742 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 RBM44Q6ZP01 1051 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 TAX1BP1Q86VP1 789 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SERPINB12Q96P63 405 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 IL17FQ96PD4 163 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 TGM7Q96PF1 710 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 RUFY1Q96T51 708 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SLC40A1Q9NP59 571 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 TREX1Q9NSU2 369 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 KCNK4Q9NYG8 393 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 APPL1Q9UKG1 709 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 TCAF1Q9Y4C2 921 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 ESYT3A0FGR9 886 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 MSH3P20585 1137 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 CCR7P32248 378 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SLC7A5Q01650 507 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 ZFP36L1Q07352 338 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 BOP1Q14137 746 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SLC14A2Q15849 920 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 RPE65Q16518 533 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 INAVAQ3KP66 663 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 RAB11FIP2Q7L804 512 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 TRIM73Q86UV7 250 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 FAM129CQ86XR2 697 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 RAVER1Q8IY67 606 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 OR5AR1Q8NGP9 310 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 FAM174AQ8TBP5 190 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SCG3Q8WXD2 468 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 ART4Q93070 314 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 C12orf66Q96MD2 445 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SLC46A1Q96NT5 459 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 SLC38A3Q99624 504 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 EVA1BQ9NVM1 165 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 B3GALT1Q9Y5Z6 326 aa5.58□□□□□ -1.52
CPNE3-208ENST00000614678 HELZ2Q9BYK8 2649 aaKnown RBP5.58□□□□□ -1.52
CPNE3-208ENST00000614678 MED13Q9UHV7 2174 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 IGHV5-51A0A0C4DH38 117 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 TRBV5-4A0A0C4DH59 114 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 NIPSNAP2O75323 286 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 TRIM16O95361 564 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CRTAMO95727 393 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ATP1B2P14415 290 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 TEAD1P28347 426 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 MPP1Q00013 466 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 PAPD7Q5XG87 772 aaKnown RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 FAM219BQ5XKK7 198 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 TRMT10BQ6PF06 316 aaKnown RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 SNX20Q7Z614 316 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 AMZ2Q86W34 360 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 GALNT15Q8N3T1 639 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 NAT8LQ8N9F0 302 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 OR4E2Q8NGC2 313 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 OR10G6Q8NH81 332 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ATL2Q8NHH9 583 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CFAP61Q8NHU2 1237 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 KRT12Q99456 494 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 TRABDQ9H4I3 376 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 SYNPO2LQ9H987 977 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 PAK5Q9P286 719 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 DRG1Q9Y295 367 aaKnown RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 MED16Q9Y2X0 877 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 LOXL2Q9Y4K0 774 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 UTP20O75691 2785 aaKnown RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 BHMG1C9JSJ3 638 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 KMOO15229 486 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 GP1BAP07359 652 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CYP1B1Q16678 543 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CTSL3PQ5NE16 218 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 RNASEH2BQ5TBB1 312 aaKnown RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ATP1A1-AS1Q5TC04 95 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 METRNLQ641Q3 311 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ANKS6Q68DC2 871 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CASC4Q6P4E1 433 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 DRICH1Q6PGQ1 229 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 LVRNQ6Q4G3 990 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CENPUQ71F23 418 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ANKMY2Q8IV38 441 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 KDF1Q8NAX2 398 aaPredicted RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 ACTRT1Q8TDG2 376 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 USP7Q93009 1102 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 COPS8Q99627 209 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 HGH1Q9BTY7 390 aa5.57□□□□□ -1.52
CPNE3-208ENST00000614678 UNKQ9C0B0 810 aaKnown RBP5.57□□□□□ -1.52
CPNE3-208ENST00000614678 CDYLQ9Y232 598 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms