RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 ZC3H18Q86VM9 953 aaKnown RBP13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 OOSP2Q86WS3 158 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 BRSK1Q8TDC3 778 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 TFB1MQ8WVM0 346 aaKnown RBP13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 TADA1Q96BN2 335 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 SLC41A2Q96JW4 573 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 ZNF514Q96K75 400 aaPredicted RBP13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 TEKT5Q96M29 485 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 C12orf66Q96MD2 445 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 SRPK1Q96SB4 655 aaKnown RBP13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 XPO4Q9C0E2 1151 aaKnown RBP13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 WWP1Q9H0M0 922 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 ACSS2Q9NR19 701 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 ZNHIT6Q9NWK9 470 aaKnown RBP13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 EPHA6Q9UF33 1036 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 PKP3Q9Y446 797 aa13.06□□□□□ -0.32
HMGB1P24-201ENST00000611897 TEX15Q9BXT5 2789 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 OR6C74A6NCV1 312 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 TLCD2A6NGC4 264 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 ZNF487B1APH4 448 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 CST8O60676 142 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 CPNE3O75131 537 aaKnown RBP13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 SCRG1O75711 98 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 TPM3P06753 285 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 MSH3P20585 1137 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 CD68P34810 354 aaPredicted RBP13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 CA5AP35218 305 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 HMGCLP35914 325 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 IL10RAQ13651 578 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 KRT33BQ14525 404 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 GSE1Q14687 1217 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 PTPRCAPQ14761 206 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 PRKD1Q15139 912 aaPredicted RBP13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 SLC14A2Q15849 920 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 NADK2Q4G0N4 442 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 KDELC1Q6UW63 502 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 RHOT1Q8IXI2 618 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 PPM1MQ96MI6 270 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 SLC25A23Q9BV35 468 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 FSD1LQ9BXM9 530 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 TLR10Q9BXR5 811 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 HRASLS2Q9NWW9 162 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 RSPH14Q9UHP6 348 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 PCDHGA6Q9Y5G7 932 aa13.05□□□□□ -0.32
HMGB1P24-201ENST00000611897 CLEC18AA5D8T8 446 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 OR5K3A6NET4 321 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 GOLGA6L3A6NEY3 463 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 PRAMEF1O95521 474 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 POLBP06746 335 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 SLC35G4P0C7Q5 338 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 PTPN4P29074 926 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 PTGIRP43119 386 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 HSD11B2P80365 405 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 WASHC5Q12768 1159 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 GPS2Q13227 327 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 SEMA5AQ13591 1074 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 ITGA9Q13797 1035 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 TFDP2Q14188 446 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 LONRF2Q1L5Z9 754 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 C4orf17Q53FE4 359 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 TMTC4Q5T4D3 741 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 PRAMEF17Q5VTA0 474 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 FAM69BQ5VUD6 431 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 CLEC18BQ6UXF7 455 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 PID1Q7Z2X4 250 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 CCDC50Q8IVM0 306 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 RHOT2Q8IXI1 618 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 CLEC18CQ8NCF0 446 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 DDHD1Q8NEL9 900 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 SPDYE1Q8NFV5 336 aaPredicted RBP13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 OR8K1Q8NGG5 319 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 CPT1CQ8TCG5 803 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 OXNAD1Q96HP4 312 aaPredicted RBP13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 FICDQ9BVA6 458 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 RAB33BQ9H082 229 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 TRABDQ9H4I3 376 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 DDX56Q9NY93 547 aaKnown RBP13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 HACD3Q9P035 362 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 IL17CQ9P0M4 197 aa13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 SPENQ96T58 3664 aaKnown RBP13.04□□□□□ -0.32
HMGB1P24-201ENST00000611897 SEC16AO15027 2179 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 SHANK1Q9Y566 2161 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 MACROD2A1Z1Q3 448 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 GSAPA4D1B5 854 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 STX7O15400 261 aaKnown RBP13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 TPM1P09493 284 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 POLR2CP19387 275 aaPredicted RBP13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 HLA-DPA1P20036 260 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 COMTP21964 271 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 CDH3P22223 829 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 HNRNPH3P31942 346 aaKnown RBP13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 ARHGAP25P42331 645 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 CDKN2BP42772 138 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 TUBB4BP68371 445 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 DMPKQ09013 629 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 TUBB2AQ13885 445 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 SLC1A5Q15758 541 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 UGT8Q16880 541 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 ZDHHC20Q5W0Z9 365 aa13.03□□□□□ -0.32
HMGB1P24-201ENST00000611897 BZW1Q7L1Q6 419 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms