RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 IGSF21Q96ID5 467 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 FAM84BQ96KN1 310 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 CTAGE1Q96RT6 745 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 C1QTNF4Q9BXJ3 329 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 SEMA6AQ9H2E6 1030 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 LRRC4Q9HBW1 653 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 GDE1Q9NZC3 331 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 NFKBIL1Q9UBC1 381 aaPredicted RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 GAGE2DQ9UEU5 116 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 RALYQ9UKM9 306 aaKnown RBP4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 PCDHGB1Q9Y5G3 927 aa4.14□□□□□ -1.75
SMCHD1-213ENST00000609587 ZCWPW2A0A1B0GU75 182 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 ANKRD66B4E2M5 251 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 ACOT8O14734 319 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 EIF3DO15371 548 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 PRAMEF11O60813 436 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 WDR1O75083 606 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 CREG1O75629 220 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 TGFB3P10600 412 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 FGF3P11487 239 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 MELKQ14680 651 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 ASIC2Q16515 512 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 SNAPC1Q16533 368 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 RAB6CQ53S08 254 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 C9orf152Q5JTZ5 239 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 ERMARDQ5T6L9 678 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 TMEM211Q6ICI0 200 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 OR7E24Q6IFN5 339 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 RPUSD3Q6P087 351 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 ADIPOR2Q86V24 386 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 CEP57Q86XR8 500 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 AFAP1Q8N556 730 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 GBGT1Q8N5D6 347 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 TSPAN14Q8NG11 270 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 LNX1Q8TBB1 728 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 WDR20Q8TBZ3 569 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 TTC14Q96N46 770 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 IL17FQ96PD4 163 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 SLC22A12Q96S37 553 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 RAB6CQ9H0N0 254 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 DDX31Q9H8H2 851 aaKnown RBP4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 EBF2Q9HAK2 575 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 CRNNQ9UBG3 495 aaPredicted RBP4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 ANAPC2Q9UJX6 822 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 DLGAP4Q9Y2H0 992 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 YIPF1Q9Y548 306 aa4.13□□□□□ -1.75
SMCHD1-213ENST00000609587 C15orf62A8K5M9 175 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 UBE2CO00762 179 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 SSX4O60224 188 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 PSMD10O75832 226 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 BMP10O95393 424 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 SNTB1Q13884 538 aaKnown RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 IL11RAQ14626 422 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 FAM109BQ6ICB4 259 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 TEX38Q6PEX7 206 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 TUBA1AQ71U36 451 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 MUC20Q8N307 709 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 RBM15BQ8NDT2 890 aaKnown RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 RDM1Q8NG50 284 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 LMO3Q8TAP4 145 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 TAS1R2Q8TE23 839 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 ERLEC1Q96DZ1 483 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 PGAP3Q96FM1 320 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 CNDP2Q96KP4 475 aaKnown RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 PRMT6Q96LA8 375 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 FAM81BQ96LP2 452 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 NEK1Q96PY6 1258 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 TUBA1CQ9BQE3 449 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 RABEP2Q9H5N1 569 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 HHATLQ9HCP6 504 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 CFDP1Q9UEE9 299 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF711Q9Y462 761 aa4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 ASTN2O75129 1339 aaPredicted RBP4.12□□□□□ -1.75
SMCHD1-213ENST00000609587 TCRBV21S2A2A0A5A6 115 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 TRBC2A0A5B9 178 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 DENND3A2RUS2 1198 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 ASPDHA6ND91 283 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 KRTAP9-6A8MVA2 160 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 PRSS44E7EML9 344 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 TULP2O00295 520 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 TO15178 435 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 DKC1O60832 514 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 WISP2O76076 250 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 ZNF23P17027 643 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 GM2AP17900 193 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 PTMSP20962 102 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 MCCP23508 829 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 DNASE1P24855 282 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 GABRA5P31644 462 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 ARCN1P48444 511 aaKnown RBP4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 FUT6P51993 359 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 CDH13P55290 713 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 EEF1A2Q05639 463 aaKnown RBP4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 COASYQ13057 564 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 PLA2G7Q13093 441 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 ALCAMQ13740 583 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 KYNUQ16719 465 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 LETM2Q2VYF4 491 aa4.11□□□□□ -1.75
SMCHD1-213ENST00000609587 CBWD6Q4V339 395 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms