RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 KATNA1O75449 491 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 SRP72O76094 671 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 PRAMEF1O95521 474 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 FURINP09958 794 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 CCNYL3P0C7X3 344 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 MTHFD1P11586 935 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 MSH3P20585 1137 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 PBLDP30039 288 aaPredicted RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 AKT1P31749 480 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 CTNNA1P35221 906 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 CYLC1P35663 651 aaPredicted RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 DLSTP36957 453 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 XIAPP98170 497 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 OTUD4Q01804 1114 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 OLIG2Q13516 323 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 KCNAB1Q14722 419 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 LONRF2Q1L5Z9 754 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.45□□□□□ -1.22
CUX1-219ENST00000606749 FNBP1LQ5T0N5 605 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 ATP1A1-AS1Q5TC04 95 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 CCDC181Q5TID7 509 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 ITPRIPL1Q6GPH6 555 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 CAPRIN2Q6IMN6 1127 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 KLHL35Q6PF15 583 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 DET1Q7L5Y6 550 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 BPHLQ86WA6 291 aaPredicted RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 PPP1R3BQ86XI6 285 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 OR2L2Q8NH16 312 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 ACTL9Q8TC94 416 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 NAT14Q8WUY8 206 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 ZFPM2Q8WW38 1151 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 UBXN4Q92575 508 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 STAMBPL1Q96FJ0 436 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 ABHD17AQ96GS6 310 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 ZNF514Q96K75 400 aaPredicted RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 CALR3Q96L12 384 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 FCRL4Q96PJ5 515 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 INSM2Q96T92 566 aaPredicted RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 MAP3K3Q99759 626 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 APOL2Q9BQE5 337 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 FERMT1Q9BQL6 677 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 OSBPL8Q9BZF1 889 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 WWP1Q9H0M0 922 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 ASB8Q9H765 288 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 PDE7BQ9NP56 450 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 LUC7LQ9NQ29 371 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 ZNF71Q9NQZ8 489 aaPredicted RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 HRASLS2Q9NWW9 162 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 ACSL5Q9ULC5 683 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 AAR2Q9Y312 384 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 PCDHB3Q9Y5E6 796 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 PCDHGA6Q9Y5G7 932 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 KCNMB2Q9Y691 235 aa7.45□□□□□ -1.22
CUX1-219ENST00000606749 CFAP20Q9Y6A4 193 aaKnown RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 EPN1Q9Y6I3 576 aaPredicted RBP7.45□□□□□ -1.22
CUX1-219ENST00000606749 UBA6A0AVT1 1052 aaPredicted RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 KLHL33A6NCF5 533 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 OR5K3A6NET4 321 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 SOWAHDA6NJG2 315 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 AGAP14A8MT82 685 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 BTNL10A8MVZ5 291 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 KCNN4O15554 427 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 PJA2O43164 708 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 TIAF1O95411 115 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 CRTAMO95727 393 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 RECKO95980 971 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 MT-ND3P03897 115 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 POLBP06746 335 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 RBP3P10745 1247 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 PYGMP11217 842 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 CTNNA2P26232 953 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 PSMB4P28070 264 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 PTPN7P35236 360 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 NAP1L1P55209 391 aaKnown RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 RWDD2BP57060 319 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 EIF3EP60228 445 aaKnown RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 TLE1Q04724 770 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 TUBB3Q13509 450 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 ERV3-1Q14264 604 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 PRPSAP1Q14558 356 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 PLCL1Q15111 1095 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 SKIDA1Q1XH10 827 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 BCL7AQ4VC05 210 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 DENND5AQ6IQ26 1287 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 PWWP2BQ6NUJ5 590 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 AADACL2Q6P093 401 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 CYB5D1Q6P9G0 228 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 DARS2Q6PI48 645 aaKnown RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 CERS6Q6ZMG9 384 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 KMT5CQ86Y97 462 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 CDKL3Q8IVW4 592 aaPredicted RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 CFAP206Q8IYR0 622 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 D2HGDHQ8N465 521 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 SIDT2Q8NBJ9 832 aaKnown RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 SPDYE1Q8NFV5 336 aaPredicted RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 OR13C4Q8NGS5 318 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 C9orf43Q8TAL5 461 aaPredicted RBP7.44□□□□□ -1.22
CUX1-219ENST00000606749 CCDC110Q8TBZ0 833 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 ALG3Q92685 438 aa7.44□□□□□ -1.22
CUX1-219ENST00000606749 LINC00615Q96LM1 132 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms