RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 METRNLQ641Q3 311 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 CACNA2D3Q8IZS8 1091 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 NXPE1Q8N323 547 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 GPR150Q8NGU9 434 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 OR2L2Q8NH16 312 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 HEXDCQ8WVB3 486 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 ZDHHC12Q96GR4 267 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 COPS8Q99627 209 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 ACSL5Q9ULC5 683 aa17.74■□□□□ 0.43
CCDC12-208ENST00000603885 POLR1CO15160 346 aaPredicted RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 ARHGAP6O43182 974 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 RASSF9O75901 435 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 AP2A1O95782 977 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 MTHFD1P11586 935 aaKnown RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 MC4RP32245 332 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 LEPRP48357 1165 aaKnown RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 LY6DQ14210 128 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 PLCL1Q15111 1095 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 GPR33Q49SQ1 333 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 IRGCQ6NXR0 463 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 KLHL35Q6PF15 583 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 ZNF843Q8N446 348 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 NAT14Q8WUY8 206 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 ATG4AQ8WYN0 398 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 DNAJC1Q96KC8 554 aaKnown RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 LINC00615Q96LM1 132 aaPredicted RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 FRMD8P1Q9BZ68 369 aaPredicted RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 WWP1Q9H0M0 922 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 ZNF768Q9H5H4 540 aaKnown RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 FAM96AQ9H5X1 160 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 APMAPQ9HDC9 416 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 IMP3Q9NV31 184 aaKnown RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 SIDT1Q9NXL6 827 aaKnown RBP17.73■□□□□ 0.43
CCDC12-208ENST00000603885 FAM8A1Q9UBU6 413 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 EPHA6Q9UF33 1036 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 PILRAQ9UKJ1 303 aa17.73■□□□□ 0.43
CCDC12-208ENST00000603885 CCL22O00626 93 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 ITGB2P05107 769 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 SLC35G4P0C7Q5 338 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 TPH1P17752 444 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 WT1P19544 449 aaPredicted RBP17.72■□□□□ 0.43
CCDC12-208ENST00000603885 STIP1P31948 543 aaKnown RBP17.72■□□□□ 0.43
CCDC12-208ENST00000603885 SEPHS1P49903 392 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 FOXM1Q08050 763 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 SEPT6Q14141 434 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 POU6F1Q14863 301 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 PRSS42Q7Z5A4 293 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 LINC00523Q86TU6 105 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 NLGN4XQ8N0W4 816 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 TAB3Q8N5C8 712 aaPredicted RBP17.72■□□□□ 0.43
CCDC12-208ENST00000603885 NLGN4YQ8NFZ3 816 aaPredicted RBP17.72■□□□□ 0.43
CCDC12-208ENST00000603885 C12orf66Q96MD2 445 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 RAB33BQ9H082 229 aa17.72■□□□□ 0.43
CCDC12-208ENST00000603885 NLE1Q9NVX2 485 aaPredicted RBP17.72■□□□□ 0.43
CCDC12-208ENST00000603885 GCN1Q92616 2671 aaKnown RBP17.72■□□□□ 0.43
CCDC12-208ENST00000603885 H7C0S8 307 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 SGTAO43765 313 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 LIASO43766 372 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 STK17BO94768 372 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 ATP1B2P14415 290 aaPredicted RBP17.71■□□□□ 0.43
CCDC12-208ENST00000603885 LIFP15018 202 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 MAP4P27816 1152 aaKnown RBP17.71■□□□□ 0.43
CCDC12-208ENST00000603885 PRLHRP49683 370 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 OASLQ15646 514 aaKnown RBP17.71■□□□□ 0.43
CCDC12-208ENST00000603885 ZRANB3Q5FWF4 1079 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 CACHD1Q5VU97 1274 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 FAM92BQ6ZTR7 304 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 SLC13A5Q86YT5 568 aaPredicted RBP17.71■□□□□ 0.43
CCDC12-208ENST00000603885 HM13Q8TCT9 377 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 STYXQ8WUJ0 223 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 MED8Q96G25 268 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 ALS2CR12Q96Q35 445 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 INSM2Q96T92 566 aaPredicted RBP17.71■□□□□ 0.43
CCDC12-208ENST00000603885 SPRY4Q9C004 299 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 ZDHHC3Q9NYG2 299 aa17.71■□□□□ 0.43
CCDC12-208ENST00000603885 TMEM184BQ9Y519 407 aaPredicted RBP17.71■□□□□ 0.43
CCDC12-208ENST00000603885 CFAP20Q9Y6A4 193 aaKnown RBP17.71■□□□□ 0.43
CCDC12-208ENST00000603885 COL6A6A6NMZ7 2263 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 TRBV5-4A0A0C4DH59 114 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 ERI2A8K979 691 aaKnown RBP17.7■□□□□ 0.42
CCDC12-208ENST00000603885 KIF1CO43896 1103 aaKnown RBP17.7■□□□□ 0.42
CCDC12-208ENST00000603885 ACRV1P26436 265 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 RPS6KA1Q15418 735 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 TAS2R42Q7RTR8 314 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 SERPINA9Q86WD7 417 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 CFAP206Q8IYR0 622 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 ZFPM2Q8WW38 1151 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 KLHL6Q8WZ60 621 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 KIAA1143Q96AT1 154 aaPredicted RBP17.7■□□□□ 0.42
CCDC12-208ENST00000603885 ARHGAP9Q9BRR9 750 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 CCM2Q9BSQ5 444 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 SEMA4CQ9C0C4 833 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 TRIT1Q9H3H1 467 aaKnown RBP17.7■□□□□ 0.42
CCDC12-208ENST00000603885 VPS37BQ9H9H4 285 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 PIH1D1Q9NWS0 290 aaKnown RBP17.7■□□□□ 0.42
CCDC12-208ENST00000603885 ZNF148Q9UQR1 794 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 ZNF462Q96JM2 2506 aa17.7■□□□□ 0.42
CCDC12-208ENST00000603885 IGLV3-16A0A075B6K0 115 aa17.69■□□□□ 0.42
CCDC12-208ENST00000603885 C17orf113A0A1B0GUU1 675 aa17.69■□□□□ 0.42
CCDC12-208ENST00000603885 GAS8O95995 478 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms