RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 DET1Q7L5Y6 550 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 CNGA4Q8IV77 575 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 CCDC50Q8IVM0 306 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 BEND7Q8N7W2 519 aaPredicted RBP12.87□□□□□ -0.35
RPS28-204ENST00000602140 CT55Q8WUE5 264 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 SLC41A2Q96JW4 573 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 QKIQ96PU8 341 aaKnown RBP eCLIP12.87□□□□□ -0.35
RPS28-204ENST00000602140 FSD1LQ9BXM9 530 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 TWSG1Q9GZX9 223 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 LHX9Q9NQ69 397 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 RSPH14Q9UHP6 348 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 TRHDEQ9UKU6 1024 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 PCDHGA6Q9Y5G7 932 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 ARL5AQ9Y689 179 aa12.87□□□□□ -0.35
RPS28-204ENST00000602140 UBA6A0AVT1 1052 aaPredicted RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 HACD1B0YJ81 288 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 AKR1B15C9JRZ8 316 aaPredicted RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 PRAMEF1O95521 474 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 AGTP01019 485 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 NTRK1P04629 796 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 EBLN1P0CF75 366 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 MTHFD1P11586 935 aaKnown RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 AKT1P31749 480 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 MARCKSL1P49006 195 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 ARL4DP49703 201 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 HADHBP55084 474 aaKnown RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 ACY1Q03154 408 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 SRSF1Q07955 248 aaKnown RBP eCLIP12.86□□□□□ -0.35
RPS28-204ENST00000602140 KLRB1Q12918 225 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 XRCC4Q13426 336 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 UBAP2LQ14157 1087 aaKnown RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 LONRF2Q1L5Z9 754 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 DNTTIP2Q5QJE6 756 aaKnown RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 METRNLQ641Q3 311 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 KATNAL2Q8IYT4 538 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 RCOR2Q8IZ40 523 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 ZNF398Q8TD17 642 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 NAT14Q8WUY8 206 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 ZNF514Q96K75 400 aaPredicted RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 FCRL4Q96PJ5 515 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 HEMGNQ9BXL5 484 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 WWP1Q9H0M0 922 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 C10orf88Q9H8K7 445 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 AKIRIN1Q9H9L7 192 aaPredicted RBP12.86□□□□□ -0.35
RPS28-204ENST00000602140 FGF21Q9NSA1 209 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 SMOXQ9NWM0 555 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 HRASLS2Q9NWW9 162 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 FAM8A1Q9UBU6 413 aa12.86□□□□□ -0.35
RPS28-204ENST00000602140 PTPN13Q12923 2485 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 OR5K3A6NET4 321 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 MGAT4DA6NG13 374 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 TLCD2A6NGC4 264 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 C21orf140B9A014 251 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 H7C0C1 242 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 RFPL1O75677 317 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 RECKO95980 971 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 PTMSP20962 102 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 LPOP22079 712 aaPredicted RBP12.85□□□□□ -0.35
RPS28-204ENST00000602140 RBL1P28749 1068 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 MAGEA1P43355 309 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 ATP5OP48047 213 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 PMS2P54278 862 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 GEMP55040 296 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 HSD11B2P80365 405 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 TCTN3Q6NUS6 607 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 DUS1LQ6P1R4 473 aaKnown RBP12.85□□□□□ -0.35
RPS28-204ENST00000602140 FAM199XQ6PEV8 388 aaPredicted RBP12.85□□□□□ -0.35
RPS28-204ENST00000602140 BPHLQ86WA6 291 aaPredicted RBP12.85□□□□□ -0.35
RPS28-204ENST00000602140 KMT5CQ86Y97 462 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 TEX19Q8NA77 164 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 RNF214Q8ND24 703 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 SPDYE1Q8NFV5 336 aaPredicted RBP12.85□□□□□ -0.35
RPS28-204ENST00000602140 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 RUFY1Q96T51 708 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 CD180Q99467 661 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 FICDQ9BVA6 458 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 GBA3Q9H227 469 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 ACTL8Q9H568 366 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 ASB8Q9H765 288 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 TLK1Q9UKI8 766 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 TFR2Q9UP52 801 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 PLAAQ9Y263 795 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 MAN2B2Q9Y2E5 1009 aa12.85□□□□□ -0.35
RPS28-204ENST00000602140 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.85□□□□□ -0.35
RPS28-204ENST00000602140 OR6C74A6NCV1 312 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 C2orf81A6NN90 581 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 ANXA9O76027 345 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 SRP72O76094 671 aaKnown RBP12.84□□□□□ -0.35
RPS28-204ENST00000602140 RPS18P62269 152 aaKnown RBP12.84□□□□□ -0.35
RPS28-204ENST00000602140 TBX2Q13207 712 aaPredicted RBP12.84□□□□□ -0.35
RPS28-204ENST00000602140 TAF1AQ15573 450 aaPredicted RBP12.84□□□□□ -0.35
RPS28-204ENST00000602140 ARMC6Q6NXE6 501 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 ASB18Q6ZVZ8 466 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 OOSP2Q86WS3 158 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 D2HGDHQ8N465 521 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 OR4K2Q8NGD2 314 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 OR2L2Q8NH16 312 aa12.84□□□□□ -0.35
RPS28-204ENST00000602140 KRT35Q92764 455 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms