RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 GATA5Q9BWX5 397 aaPredicted RBP17.7■□□□□ 0.42
VRK3-225ENST00000601912 TEX101Q9BY14 249 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 FAM126AQ9BYI3 521 aaPredicted RBP17.7■□□□□ 0.42
VRK3-225ENST00000601912 CYP4F12Q9HCS2 524 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 EBF1Q9UH73 591 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 TSR3Q9UJK0 312 aaKnown RBP17.7■□□□□ 0.42
VRK3-225ENST00000601912 GPR34Q9UPC5 381 aa17.7■□□□□ 0.42
VRK3-225ENST00000601912 NEMP2A6NFY4 417 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 NUAK1O60285 661 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 SNX3O60493 162 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 IGLV3-19P01714 112 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 GSTM1P09488 218 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 GFAPP14136 432 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 OXTRP30559 389 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 PPP2CBP62714 309 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 PPP2CAP67775 309 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 GSTM4Q03013 218 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 GAS6Q14393 721 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 SYTL3Q4VX76 610 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 CES4AQ5XG92 561 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 SPATA21Q7Z572 469 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 CCNYL1Q8N7R7 359 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 PHF21BQ96EK2 531 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 CD93Q9NPY3 652 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 IKZF3Q9UKT9 509 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 NUMA1Q14980 2115 aa17.69■□□□□ 0.42
VRK3-225ENST00000601912 GPR89AB7ZAQ6 455 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 UBXN8O00124 270 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 SLC31A1O15431 190 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 SNX2O60749 519 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 ZNF217O75362 1048 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 TGDSO95455 350 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 SEMA4FO95754 770 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 HSPA4LO95757 839 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 GPR89BP0CG08 455 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 MPC1LP0DKB6 136 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 ZNF8P17098 575 aaPredicted RBP17.68■□□□□ 0.42
VRK3-225ENST00000601912 IMPDH1P20839 514 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 SERPINB5P36952 375 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 GBX1Q14549 363 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 CYHR1Q6ZMK1 362 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 CACNA2D3Q8IZS8 1091 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 ANKS4BQ8N8V4 417 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 SKA2Q8WVK7 121 aaPredicted RBP17.68■□□□□ 0.42
VRK3-225ENST00000601912 TMEM159Q96B96 161 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 CNDP1Q96KN2 507 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 HHIPQ96QV1 700 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 TRIM55Q9BYV6 548 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 DRC3Q9H069 523 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 TMEM98Q9Y2Y6 226 aa17.68■□□□□ 0.42
VRK3-225ENST00000601912 RAD51BO15315 384 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 ITM2AO43736 263 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 NPHS1O60500 1241 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 GPC4O75487 556 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 SNUPNO95149 360 aaKnown RBP17.67■□□□□ 0.42
VRK3-225ENST00000601912 MTHFD2P13995 350 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 OVGP1Q12889 678 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 RCN2Q14257 317 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 PFKFB4Q16877 469 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 DOK6Q6PKX4 331 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 NEK10Q6ZWH5 1172 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 GJD3Q8N144 294 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 FBXO39Q8N4B4 442 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 SPEM1Q8N4L4 309 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 PTGR2Q8N8N7 351 aaPredicted RBP17.67■□□□□ 0.42
VRK3-225ENST00000601912 CCDC197Q8NCU1 140 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 DENND6BQ8NEG7 585 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 PJA1Q8NG27 643 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 SEC16BQ96JE7 1060 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 LINC00615Q96LM1 132 aaPredicted RBP17.67■□□□□ 0.42
VRK3-225ENST00000601912 C20orf27Q9GZN8 174 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 ZNF395Q9H8N7 513 aaPredicted RBP17.67■□□□□ 0.42
VRK3-225ENST00000601912 CD274Q9NZQ7 290 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 OR1A2Q9Y585 309 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 C17orf113A0A1B0GUU1 675 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 LYPLA1O75608 230 aaPredicted RBP17.67■□□□□ 0.42
VRK3-225ENST00000601912 SLCO2B1O94956 709 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 S100BP04271 92 aaPredicted RBP17.67■□□□□ 0.42
VRK3-225ENST00000601912 C8GP07360 202 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 MYCLP1P12525 358 aaPredicted RBP17.67■□□□□ 0.42
VRK3-225ENST00000601912 HERVK_113P63132 956 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 TGFBIQ15582 683 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 CGB2Q6NT52 195 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 SBSNQ6UWP8 590 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 CLDN23Q96B33 292 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 L3HYPDHQ96EM0 354 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 TMEM237Q96Q45 408 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 LGR4Q9BXB1 951 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 ERVK-6Q9BXR3 956 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 CHRDQ9H2X0 955 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 C2orf42Q9NWW7 574 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 NUDT4Q9NZJ9 180 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 KLHL14Q9P2G3 628 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 MUTYHQ9UIF7 546 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 CYP8B1Q9UNU6 501 aa17.67■□□□□ 0.42
VRK3-225ENST00000601912 CACNB4O00305 520 aaPredicted RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 FPGTO14772 594 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 LIN7AO14910 233 aaPredicted RBP17.66■□□□□ 0.42
VRK3-225ENST00000601912 CHUKO15111 745 aa17.66■□□□□ 0.42
VRK3-225ENST00000601912 KLK8O60259 260 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms