RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MPP1Q00013 466 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 IL9RQ01113 521 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 SLMAPQ14BN4 828 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 BCL7AQ4VC05 210 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF449Q6P9G9 518 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 CRTC3Q6UUV7 619 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 C2CD4AQ8NCU7 369 aaPredicted RBP18.55■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF548Q8NEK5 533 aaPredicted RBP18.55■□□□□ 0.56
CCDC9-205ENST00000600117 SAP25Q8TEE9 199 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 SETD7Q8WTS6 366 aaKnown RBP18.55■□□□□ 0.56
CCDC9-205ENST00000600117 PARD6BQ9BYG5 372 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 CLPBQ9H078 707 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 UCKL1Q9NWZ5 548 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 SLC23A2Q9UGH3 650 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 ZNHIT2Q9UHR6 403 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 GPR34Q9UPC5 381 aa18.55■□□□□ 0.56
CCDC9-205ENST00000600117 PIKFYVEQ9Y2I7 2098 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 PRR19A6NJB7 356 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 FAM159BA6NKW6 160 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 PRMT5O14744 637 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 KMOO15229 486 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 SPAG6O75602 509 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 DKK1O94907 266 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 AP2A2O94973 939 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF7P17097 686 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 RPS3P23396 243 aaKnown RBP eCLIP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 DGKAP23743 735 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 GABRB3P28472 473 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 PRLHRP49683 370 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 C1orf61Q13536 156 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 PRRT3Q5FWE3 981 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 RNF187Q5TA31 235 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 NRROSQ86YC3 692 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 TRAPPC5Q8IUR0 188 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 SLC25A45Q8N413 288 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 BEND7Q8N7W2 519 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 CCL4L1Q8NHW4 92 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 FBF1Q8TES7 1133 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF514Q96K75 400 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 FUT8Q9BYC5 575 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 VPS37BQ9H9H4 285 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 PPANQ9NQ55 473 aaKnown RBP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 FBXO6Q9NRD1 293 aaPredicted RBP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 INTS10Q9NVR2 710 aaKnown RBP18.54■□□□□ 0.56
CCDC9-205ENST00000600117 SPASTQ9UBP0 616 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 RAB21Q9UL25 225 aa18.54■□□□□ 0.56
CCDC9-205ENST00000600117 MYO18BQ8IUG5 2567 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 TRABD2BA6NFA1 517 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 CXorf49A8MYA2 514 aaPredicted RBP18.53■□□□□ 0.56
CCDC9-205ENST00000600117 TK2O00142 265 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 AQP9O43315 295 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 PCDHGA12O60330 932 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 PIAS1O75925 651 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 GIMD1P0DJR0 217 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 LEPRP48357 1165 aaKnown RBP18.53■□□□□ 0.56
CCDC9-205ENST00000600117 ADARP55265 1226 aaKnown RBP18.53■□□□□ 0.56
CCDC9-205ENST00000600117 CTBSQ01459 385 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 CYP4F3Q08477 520 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 TCEA2Q15560 299 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 CTSL3PQ5NE16 218 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 KIAA0408Q6ZU52 694 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 GALNT7Q86SF2 657 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 GATAD2AQ86YP4 633 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 GALNT15Q8N3T1 639 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 FSTL5Q8N475 847 aaPredicted RBP18.53■□□□□ 0.56
CCDC9-205ENST00000600117 BAHD1Q8TBE0 780 aaPredicted RBP18.53■□□□□ 0.56
CCDC9-205ENST00000600117 GPBAR1Q8TDU6 330 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 LMX1AQ8TE12 382 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 CRELD1Q96HD1 420 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 LINC00615Q96LM1 132 aaPredicted RBP18.53■□□□□ 0.56
CCDC9-205ENST00000600117 BIRC8Q96P09 236 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 TIMM29Q9BSF4 260 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 TOR4AQ9NXH8 423 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 GULP1Q9UBP9 304 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 PCDHGB2Q9Y5G2 931 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 PSAT1Q9Y617 370 aa18.53■□□□□ 0.56
CCDC9-205ENST00000600117 DNMT3AQ9Y6K1 912 aaPredicted RBP18.53■□□□□ 0.56
CCDC9-205ENST00000600117 POP7O75817 140 aaKnown RBP18.52■□□□□ 0.56
CCDC9-205ENST00000600117 HAUS5O94927 633 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 ACSL3O95573 720 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 ACP5P13686 325 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 CTSEP14091 401 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 AK4P27144 223 aaPredicted RBP18.52■□□□□ 0.56
CCDC9-205ENST00000600117 STX2P32856 288 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 PMS2P54278 862 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 LRP8Q14114 963 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 PLA2G4EQ3MJ16 856 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 ZNF658BQ4V348 819 aaPredicted RBP18.52■□□□□ 0.56
CCDC9-205ENST00000600117 CNSTQ6PJW8 725 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 XKR5Q6UX68 686 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 TRMT10CQ7L0Y3 403 aaKnown RBP18.52■□□□□ 0.56
CCDC9-205ENST00000600117 CHST15Q7LFX5 561 aaPredicted RBP18.52■□□□□ 0.56
CCDC9-205ENST00000600117 LRRC6Q86X45 466 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 GABPB2Q8TAK5 448 aaPredicted RBP18.52■□□□□ 0.56
CCDC9-205ENST00000600117 AENQ8WTP8 325 aaKnown RBP18.52■□□□□ 0.56
CCDC9-205ENST00000600117 CDC6Q99741 560 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 EPB41L4BQ9H329 900 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 ZFATQ9P243 1243 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 VPS9D1Q9Y2B5 631 aa18.52■□□□□ 0.56
CCDC9-205ENST00000600117 CRYL1Q9Y2S2 319 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms