RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 PPM1FP49593 454 aaPredicted RBP14.9□□□□□ -0.02
LIG1-219ENST00000600055 CYP4F3Q08477 520 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 DHX34Q14147 1143 aaKnown RBP14.9□□□□□ -0.02
LIG1-219ENST00000600055 RPE65Q16518 533 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 MAP9Q49MG5 647 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 ANKRD20A4Q4UJ75 823 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 MSS51Q4VC12 460 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 KIAA0930Q6ICG6 404 aaPredicted RBP14.9□□□□□ -0.02
LIG1-219ENST00000600055 DUS1LQ6P1R4 473 aaKnown RBP14.9□□□□□ -0.02
LIG1-219ENST00000600055 NAPRTQ6XQN6 538 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 CERS6Q6ZMG9 384 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 ZNF574Q6ZN55 896 aaPredicted RBP14.9□□□□□ -0.02
LIG1-219ENST00000600055 PCGF5Q86SE9 256 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 HOOK3Q86VS8 718 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 OTUD6BQ8N6M0 293 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 GPR150Q8NGU9 434 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 SH3KBP1Q96B97 665 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 CXorf40BQ96DE9 158 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 RMDN2Q96LZ7 410 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 INSM2Q96T92 566 aaPredicted RBP14.9□□□□□ -0.02
LIG1-219ENST00000600055 TTC1Q99614 292 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 SEMA6CQ9H3T2 930 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 COG4Q9H9E3 785 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 TMEM9Q9P0T7 183 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 AKAP13Q12802 2813 aa14.9□□□□□ -0.02
LIG1-219ENST00000600055 ZCWPW2A0A1B0GU75 182 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 C17orf113A0A1B0GUU1 675 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 FAM237BA0A1B0GVD1 139 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 RAD51CO43502 376 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 CPNE6O95741 557 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 MPOP05164 745 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 PROS1P07225 676 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 F7P08709 466 aaPredicted RBP14.89□□□□□ -0.03
LIG1-219ENST00000600055 ITGB6P18564 788 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 MPSTP25325 297 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 PDHA2P29803 388 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 PREPP48147 710 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 ITGA8P53708 1063 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 INHBCP55103 352 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 ZFP36L1Q07352 338 aaKnown RBP14.89□□□□□ -0.03
LIG1-219ENST00000600055 DHX9Q08211 1270 aaKnown RBP14.89□□□□□ -0.03
LIG1-219ENST00000600055 BRD3Q15059 726 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 HIBCHQ6NVY1 386 aaPredicted RBP14.89□□□□□ -0.03
LIG1-219ENST00000600055 TMEM26Q6ZUK4 368 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 TMEM135Q86UB9 458 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 PIM3Q86V86 326 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 SLITRK4Q8IW52 837 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 LKAAEAR1Q8TD35 194 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 JPH3Q8WXH2 748 aaPredicted RBP14.89□□□□□ -0.03
LIG1-219ENST00000600055 ZNF592Q92610 1267 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 AHCYL2Q96HN2 611 aaKnown RBP14.89□□□□□ -0.03
LIG1-219ENST00000600055 C12orf66Q96MD2 445 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 NRSN2Q9GZP1 204 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 EPB41L5Q9HCM4 733 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 SLC40A1Q9NP59 571 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 POT1Q9NUX5 634 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 IMP3Q9NV31 184 aaKnown RBP14.89□□□□□ -0.03
LIG1-219ENST00000600055 ACSL5Q9ULC5 683 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 SATB2Q9UPW6 733 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 SNX24Q9Y343 169 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 AK5Q9Y6K8 562 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 RPS6KL1Q9Y6S9 549 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 FRYQ5TBA9 3013 aa14.89□□□□□ -0.03
LIG1-219ENST00000600055 MAGEB16A2A368 324 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 KLHL33A6NCF5 533 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 IQCF5A8MTL0 148 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 EFCAB8A8MWE9 144 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 TP73O15350 636 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 ZW10O43264 779 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 URI1O94763 535 aaPredicted RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 SEC31AO94979 1220 aaKnown RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 OR56A5P0C7T3 313 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 MTHFD1P11586 935 aaKnown RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 PPARGP37231 505 aaPredicted RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 RPL21P46778 160 aaKnown RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 GABREP78334 506 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 GPLD1P80108 840 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 GPR18Q14330 331 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 RTP5Q14D33 572 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 MORF4L2Q15014 288 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 BBS9Q3SYG4 887 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 C3orf38Q5JPI3 329 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 AARS2Q5JTZ9 985 aaKnown RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 HP1BP3Q5SSJ5 553 aaPredicted RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 PHF19Q5T6S3 580 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 ARMC3Q5W041 872 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 CAPRIN2Q6IMN6 1127 aaKnown RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 FOXR1Q6PIV2 292 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 IGDCC3Q8IVU1 814 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 KRT222Q8N1A0 295 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 AVL9Q8NBF6 648 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 OR10G6Q8NH81 332 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 NCSTNQ92542 709 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 NXPE2Q96DL1 559 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 STAMBPL1Q96FJ0 436 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 SNF8Q96H20 258 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 TMEM74Q96NL1 305 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.88□□□□□ -0.03
LIG1-219ENST00000600055 OR52A5Q9H2C5 316 aa14.88□□□□□ -0.03
LIG1-219ENST00000600055 CCDC86Q9H6F5 360 aaKnown RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms