RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	KRTAP4-8	Q9BYQ9	185 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	KLC2	Q9H0B6	622 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	ATG10	Q9H0Y0	220 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	SEMA6C	Q9H3T2	930 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	TDRD3	Q9H7E2	651 aa	Known RBP	5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	GBA2	Q9HCG7	927 aa	Predicted RBP	5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	VAT1L	Q9HCJ6	419 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	KCNMB3	Q9NPA1	279 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	CNOT2	Q9NZN8	540 aa	Known RBP	5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	ARPP21	Q9UBL0	812 aa	Predicted RBP	5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	SLC24A2	Q9UI40	661 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	PLCL2	Q9UPR0	1127 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	SLC27A6	Q9Y2P4	619 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	UBE2J1	Q9Y385	318 aa	Predicted RBP	5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	SIT1	Q9Y3P8	196 aa		5.19	□□□□□ -1.58
PAF1-208	ENST00000598594	ATRNL1	Q5VV63	1379 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	PEG3	Q9GZU2	1588 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594		A0A1W2PPM1	405 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ANKRD61	A6NGH8	418 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	NPIPB5	A8MRT5	1133 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	BECN2	A8MW95	431 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ADM5	C9JUS6	153 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	USP17L23	D6RBM5	183 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	HIP1	O00291	1037 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	MAGEB2	O15479	319 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	KLK8	O60259	260 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	SERPINI2	O75830	405 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	OR5F1	O95221	314 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ECD	O95905	644 aa	Predicted RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	TGM6	O95932	706 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	HMBS	P08397	361 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	NFIC	P08651	508 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	LINGO3	P0C6S8	592 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ZCCHC18	P0CG32	403 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	PNLIP	P16233	465 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	GJA1	P17302	382 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	LBP	P18428	481 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	PTN	P21246	168 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	KCNA3	P22001	575 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	MMP8	P22894	467 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	TACR1	P25103	407 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	AZGP1	P25311	298 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ATP5C1	P36542	298 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ALDH3B1	P43353	468 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	MMP13	P45452	471 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	RAP1GAP	P47736	663 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	CNN1	P51911	297 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	CLDN8	P56748	225 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	DSTN	P60981	165 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	PDE1B	Q01064	536 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	DUSP8	Q13202	625 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	DRP2	Q13474	957 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	BFSP2	Q13515	415 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	IL13RA2	Q14627	380 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ACOX1	Q15067	660 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	PDK3	Q15120	406 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	SMN1	Q16637	294 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	UGCG	Q16739	394 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	USP41	Q3LFD5	358 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	CERKL	Q49MI3	558 aa	Predicted RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	HIKESHI	Q53FT3	197 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	KCTD11	Q693B1	232 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	TTC23L	Q6PF05	361 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ZNF852	Q6ZMS4	543 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	GPR142	Q7Z601	462 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	KIAA1328	Q86T90	577 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	FOXP4	Q8IVH2	680 aa	Predicted RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ARMC10	Q8N2F6	343 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	UBE2J2	Q8N2K1	259 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	MFSD4A	Q8N468	514 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	COMMD1	Q8N668	190 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	RNF148	Q8N7C7	305 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	NECAB1	Q8N987	351 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ASCC1	Q8N9N2	400 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594		Q8NA96	180 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	STKLD1	Q8NE28	680 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	B4GALNT2	Q8NHY0	566 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	LKAAEAR1	Q8TD35	194 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	SLC2A14	Q8TDB8	520 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	TSEN15	Q8WW01	171 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ZNF707	Q96C28	371 aa	Predicted RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	PABPC5	Q96DU9	382 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	LINGO1	Q96FE5	620 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	THOC3	Q96J01	351 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	WDR92	Q96MX6	357 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	ZNF583	Q96ND8	569 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	MNT	Q99583	582 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	FAM213A	Q9BRX8	229 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	NDC1	Q9BTX1	674 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	NUP58	Q9BVL2	599 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	SLCO5A1	Q9H2Y9	848 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	TOR3A	Q9H497	397 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	LMAN1L	Q9HAT1	526 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	KCNK9	Q9NPC2	374 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	IL26	Q9NPH9	171 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	NRBP2	Q9NSY0	501 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	DDX28	Q9NUL7	540 aa	Known RBP	5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	GTSE1	Q9NYZ3	720 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	NDUFA13	Q9P0J0	144 aa		5.18	□□□□□ -1.58
PAF1-208	ENST00000598594	VPS54	Q9P1Q0	977 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms