RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 CFAP20Q9Y6A4 193 aaKnown RBP13.5□□□□□ -0.25
SCAF1-203ENST00000598359 COL12A1Q99715 3063 aa13.5□□□□□ -0.25
SCAF1-203ENST00000598359 C5orf60A6NFR6 353 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 MIF4GDA9UHW6 222 aaKnown RBP13.49□□□□□ -0.25
SCAF1-203ENST00000598359 B4E171 279 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 STMND1H3BQB6 276 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 KIF1CO43896 1103 aaKnown RBP13.49□□□□□ -0.25
SCAF1-203ENST00000598359 PPFIA2O75334 1257 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 SRP72O76094 671 aaKnown RBP13.49□□□□□ -0.25
SCAF1-203ENST00000598359 URI1O94763 535 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-203ENST00000598359 PRSS56P0CW18 603 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 AMD1P17707 334 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 VCLP18206 1134 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 MSH3P20585 1137 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 TSPAN7P41732 249 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 SEPHS1P49903 392 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 ZNF140P52738 457 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-203ENST00000598359 PPP1CAP62136 330 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 RPE65Q16518 533 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 DCAF12Q5T6F0 453 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 AGAP9Q5VTM2 703 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 DUS1LQ6P1R4 473 aaKnown RBP13.49□□□□□ -0.25
SCAF1-203ENST00000598359 DTX3LQ8TDB6 740 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 NKD1Q969G9 470 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 HES6Q96HZ4 224 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 NAPGQ99747 312 aaPredicted RBP13.49□□□□□ -0.25
SCAF1-203ENST00000598359 DDA1Q9BW61 102 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 ZCCHC2Q9C0B9 1178 aaKnown RBP13.49□□□□□ -0.25
SCAF1-203ENST00000598359 CLMPQ9H6B4 373 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 GUCA1BQ9UMX6 200 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 PCDHGA3Q9Y5H0 932 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 PTPN13Q12923 2485 aa13.49□□□□□ -0.25
SCAF1-203ENST00000598359 MN1Q10571 1320 aaPredicted RBP13.48□□□□□ -0.25
SCAF1-203ENST00000598359 CCDC78A2IDD5 438 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.48□□□□□ -0.25
SCAF1-203ENST00000598359 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
SCAF1-203ENST00000598359 SGTAO43765 313 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 CD82P27701 267 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 CDKN1CP49918 316 aaPredicted RBP13.48□□□□□ -0.25
SCAF1-203ENST00000598359 MC2RQ01718 297 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 SEPT6Q14141 434 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 KCTD11Q693B1 232 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 XKR5Q6UX68 686 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 WASH2PQ6VEQ5 465 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 FAM92BQ6ZTR7 304 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 PLXDC1Q8IUK5 500 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 LILRA3Q8N6C8 439 aaPredicted RBP13.48□□□□□ -0.25
SCAF1-203ENST00000598359 AVL9Q8NBF6 648 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 TTC13Q8NBP0 860 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 SPDYE1Q8NFV5 336 aaPredicted RBP13.48□□□□□ -0.25
SCAF1-203ENST00000598359 SLC35B2Q8TB61 432 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 EXTL1Q92935 676 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 RTP4Q96DX8 246 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 DNAJC1Q96KC8 554 aaKnown RBP13.48□□□□□ -0.25
SCAF1-203ENST00000598359 C9orf72Q96LT7 481 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 B3GNT4Q9C0J1 378 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 WWP1Q9H0M0 922 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 UCK1Q9HA47 277 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 WASH6PQ9NQA3 447 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 POT1Q9NUX5 634 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 SMOXQ9NWM0 555 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 CRLS1Q9UJA2 301 aa13.48□□□□□ -0.25
SCAF1-203ENST00000598359 ZNF106Q9H2Y7 1883 aaKnown RBP13.48□□□□□ -0.25
SCAF1-203ENST00000598359 CTAGE9A4FU28 777 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 LDB2O43679 373 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 RAD1O60671 282 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 RASSF9O75901 435 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 CRTAMO95727 393 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 C9P02748 559 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 HALP42357 657 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 SH3BP2P78314 561 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 DMPKQ09013 629 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 POU6F1Q14863 301 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 LONRF2Q1L5Z9 754 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 PARP6Q2NL67 630 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 IRGCQ6NXR0 463 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 TIPARPQ7Z3E1 657 aaKnown RBP13.47□□□□□ -0.25
SCAF1-203ENST00000598359 MTERF4Q7Z6M4 381 aaKnown RBP13.47□□□□□ -0.25
SCAF1-203ENST00000598359 PRUNE1Q86TP1 453 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 KLHDC8BQ8IXV7 354 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 UNC5BQ8IZJ1 945 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 CACNA2D3Q8IZS8 1091 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 IL22RA1Q8N6P7 574 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 INSM2Q96T92 566 aaPredicted RBP13.47□□□□□ -0.25
SCAF1-203ENST00000598359 ASPSCR1Q9BZE9 553 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 EPB41L1Q9H4G0 881 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 ARNT2Q9HBZ2 717 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 IMP3Q9NV31 184 aaKnown RBP13.47□□□□□ -0.25
SCAF1-203ENST00000598359 SIDT1Q9NXL6 827 aaKnown RBP13.47□□□□□ -0.25
SCAF1-203ENST00000598359 CDC23Q9UJX2 597 aa13.47□□□□□ -0.25
SCAF1-203ENST00000598359 EFCAB8A8MWE9 144 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 POLBP06746 335 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 LIFP15018 202 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 MC4RP32245 332 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 CAPZBP47756 277 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 ATP1A2P50993 1020 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 RAB15P59190 212 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 KCNC4Q03721 635 aa13.46□□□□□ -0.25
SCAF1-203ENST00000598359 FOXM1Q08050 763 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms