RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ADAMTS14Q8WXS8 1223 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 SEC14L1Q92503 715 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 CCDC74AQ96AQ1 378 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 CCDC3Q9BQI4 270 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 WDR83Q9BRX9 315 aaKnown RBP14.09□□□□□ -0.15
LIG1-208ENST00000595758 ABCG4Q9H172 646 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 EPB41L5Q9HCM4 733 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 SAYSD1Q9NPB0 183 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 SCHIP1Q9P0W5 487 aaPredicted RBP14.09□□□□□ -0.15
LIG1-208ENST00000595758 DMGDHQ9UI17 866 aaKnown RBP14.09□□□□□ -0.15
LIG1-208ENST00000595758 ACSL5Q9ULC5 683 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 VPS9D1Q9Y2B5 631 aa14.09□□□□□ -0.15
LIG1-208ENST00000595758 UBA6A0AVT1 1052 aaPredicted RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 EIF3HO15372 352 aaKnown RBP eCLIP14.08□□□□□ -0.16
LIG1-208ENST00000595758 OPA1O60313 960 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 ERVK-10P10266 1014 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 BRAFP15056 766 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 PNLIPP16233 465 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 HALP42357 657 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 FASLGP48023 281 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 FOXC1Q12948 553 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 FASTKD3Q14CZ7 662 aaKnown RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 HSP90AA5PQ58FG0 334 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 STEAP4Q687X5 459 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 PTRHD1Q6GMV3 140 aaKnown RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 ZNF449Q6P9G9 518 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 RAB44Q7Z6P3 723 aaPredicted RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 SLC9B2Q86UD5 537 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 KCNMB4Q86W47 210 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 ZBED8Q8IZ13 594 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 UNC5BQ8IZJ1 945 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 CHCHD4Q8N4Q1 142 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 Q8N9G6 341 aaPredicted RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 AVL9Q8NBF6 648 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 GABPB2Q8TAK5 448 aaPredicted RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 PYROXD1Q8WU10 500 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 LPGAT1Q92604 370 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 FAM167BQ9BTA0 163 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 TSSK1BQ9BXA7 367 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 FOXP3Q9BZS1 431 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 P2RY12Q9H244 342 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 STN1Q9H668 368 aaKnown RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 L2HGDHQ9H9P8 463 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 PLAC1Q9HBJ0 212 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 FAM114A2Q9NRY5 505 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 IARS2Q9NSE4 1012 aaKnown RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 CPNE7Q9UBL6 633 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 RABGEF1Q9UJ41 708 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 PSMD13Q9UNM6 376 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 WDR37Q9Y2I8 494 aa14.08□□□□□ -0.16
LIG1-208ENST00000595758 ZFC3H1O60293 1989 aaKnown RBP14.08□□□□□ -0.16
LIG1-208ENST00000595758 DCHS1Q96JQ0 3298 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 BHMG1C9JSJ3 638 aaPredicted RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 PPM1DO15297 605 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 S1PR4O95977 384 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 ADRB1P08588 477 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 ITGB6P18564 788 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 XRCC1P18887 633 aaPredicted RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 RPS3P23396 243 aaKnown RBP eCLIP14.07□□□□□ -0.16
LIG1-208ENST00000595758 FMO4P31512 558 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 DEKP35659 375 aaKnown RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 EIF3BP55884 814 aaKnown RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 CTBP1Q13363 440 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 ZNF658BQ4V348 819 aaPredicted RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 ZNF438Q7Z4V0 828 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 CCDC25Q86WR0 208 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 DENND6AQ8IWF6 608 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 TRIM48Q8IWZ4 208 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 LILRA3Q8N6C8 439 aaPredicted RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 ELMO1Q92556 727 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 SH3KBP1Q96B97 665 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 CERS2Q96G23 380 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 WWP1Q9H0M0 922 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 COG4Q9H9E3 785 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 SARS2Q9NP81 518 aaKnown RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 PPANQ9NQ55 473 aaKnown RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 INTS10Q9NVR2 710 aaKnown RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 ZNF624Q9P2J8 865 aaPredicted RBP14.07□□□□□ -0.16
LIG1-208ENST00000595758 GNPTGQ9UJJ9 305 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 FBXO5Q9UKT4 447 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 CRYL1Q9Y2S2 319 aa14.07□□□□□ -0.16
LIG1-208ENST00000595758 RP1P56715 2156 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 NCOR2Q9Y618 2525 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 OR52A4PA6NMU1 304 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 IQCF5A8MTL0 148 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 H3BMM5 538 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 LIN7AO14910 233 aaPredicted RBP14.06□□□□□ -0.16
LIG1-208ENST00000595758 ZW10O43264 779 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 VIPP01282 170 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 ESR1P03372 595 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 SLC35G4P0C7Q5 338 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 ALDH4A1P30038 563 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 SLC19A1P41440 591 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 SLC1A2P43004 574 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 GPR3P46089 330 aa14.06□□□□□ -0.16
LIG1-208ENST00000595758 CARSP49589 748 aaKnown RBP14.06□□□□□ -0.16
LIG1-208ENST00000595758 ADARP55265 1226 aaKnown RBP14.06□□□□□ -0.16
LIG1-208ENST00000595758 UBE2IP63279 158 aaKnown RBP14.06□□□□□ -0.16
LIG1-208ENST00000595758 INSM1Q01101 510 aaPredicted RBP14.06□□□□□ -0.16
LIG1-208ENST00000595758 HHEXQ03014 270 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms