RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 RANBP9Q96S59 729 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 B3GNT4Q9C0J1 378 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 HOMER3Q9NSC5 361 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 FOXJ2Q9P0K8 574 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 AKAP7Q9P0M2 348 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 SLC2A6Q9UGQ3 507 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 RIMKLBQ9ULI2 386 aa18.11■□□□□ 0.49
SHKBP1-202ENST00000593764 MN1Q10571 1320 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 HEATR9A2RTY3 570 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 CCDC162PA2VCL2 907 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 A8MU76 341 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 C9P02748 559 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 ADRA1DP25100 572 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 FOXN2P32314 431 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 CSTF2P33240 577 aaKnown RBP eCLIP18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 HALP42357 657 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 PPM1FP49593 454 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 CLN3Q13286 438 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 DBN1Q16643 649 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 SNAP47Q5SQN1 464 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 TSTD2Q5T7W7 516 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 C4orf22Q6V702 233 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 TAS2R42Q7RTR8 314 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 GSTA5Q7RTV2 222 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 SLC35F6Q8N357 371 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 BMPERQ8N8U9 685 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 SPDYE1Q8NFV5 336 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 PMEPA1Q969W9 287 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 PDLIM2Q96JY6 352 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 PBKQ96KB5 322 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 INSM2Q96T92 566 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 WWP1Q9H0M0 922 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 EIF2B3Q9NR50 452 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 OCIAD1Q9NX40 245 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 ACSL5Q9ULC5 683 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 TTC7AQ9ULT0 858 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 IGSF10Q6WRI0 2623 aa18.1■□□□□ 0.49
SHKBP1-202ENST00000593764 CFAP99D6REC4 459 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 ZSCAN12O43309 604 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 GAS8O95995 478 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 MSNP26038 577 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 GFERP55789 205 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 ACVR1Q04771 509 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 CAPRIN2Q6IMN6 1127 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 TTC27Q6P3X3 843 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 PLXDC1Q8IUK5 500 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 CFAP206Q8IYR0 622 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 CLDN19Q8N6F1 224 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 HDAC10Q969S8 669 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 TAAR9Q96RI9 348 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 ZMYND15Q9H091 742 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 TRMT1Q9NXH9 659 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 FAM8A1Q9UBU6 413 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 TCAF1Q9Y4C2 921 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 CFAP20Q9Y6A4 193 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 CACNA1GO43497 2377 aa18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 SMG1Q96Q15 3661 aaKnown RBP18.09■□□□□ 0.49
SHKBP1-202ENST00000593764 PIKFYVEQ9Y2I7 2098 aa18.08■□□□□ 0.49
SHKBP1-202ENST00000593764 C17orf113A0A1B0GUU1 675 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 B4E171 279 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 POLBP06746 335 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 MTHFD1P11586 935 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 AMD1P17707 334 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 TSPAN7P41732 249 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 BASP1P80723 227 aaKnown RBP18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 LAMB3Q13751 1172 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 TGIF1Q15583 401 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 PIAS4Q8N2W9 510 aaPredicted RBP18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 HM13Q8TCT9 377 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 COG1Q8WTW3 980 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 RSC1A1Q92681 617 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 ART4Q93070 314 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 C9orf72Q96LT7 481 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 CCM2Q9BSQ5 444 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 AP1M1Q9BXS5 423 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 SMARCAL1Q9NZC9 954 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 KLHL3Q9UH77 587 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 PCDHGA3Q9Y5H0 932 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 PRSS21Q9Y6M0 314 aa18.08■□□□□ 0.48
SHKBP1-202ENST00000593764 TCRBV7S3A2A0A539 114 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 EFCAB7A8K855 629 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 CAPN5O15484 640 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 GOT2P00505 430 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 LEPRP48357 1165 aaKnown RBP18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 TRIP13Q15645 432 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 CYP1B1Q16678 543 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 TMEM164Q5U3C3 297 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 BROXQ5VW32 411 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 ZNF534Q76KX8 674 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 NLRP9Q7RTR0 991 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 ZFAND4Q86XD8 727 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 DTX1Q86Y01 620 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 JPH3Q8WXH2 748 aaPredicted RBP18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 PEX13Q92968 403 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 SGSM3Q96HU1 749 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 RMDN2Q96LZ7 410 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 C12orf66Q96MD2 445 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 OSBPL9Q96SU4 736 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 CPNE5Q9HCH3 593 aa18.07■□□□□ 0.48
SHKBP1-202ENST00000593764 CHRAC1Q9NRG0 131 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms