RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 NAT14Q8WUY8 206 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 TFB1MQ8WVM0 346 aaKnown RBP15.98■□□□□ 0.15
LIG1-205ENST00000593425 FCRL4Q96PJ5 515 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 CHP1Q99653 195 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 ZCCHC2Q9C0B9 1178 aaKnown RBP15.98■□□□□ 0.15
LIG1-205ENST00000593425 NBASA2RRP1 2371 aa15.98■□□□□ 0.15
LIG1-205ENST00000593425 ADCY2Q08462 1091 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 GPS2Q13227 327 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 XRCC4Q13426 336 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 SLC1A5Q15758 541 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 GPR19Q15760 415 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 TAZQ16635 292 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 ODF2Q5BJF6 829 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 FNBP1LQ5T0N5 605 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 ZDHHC20Q5W0Z9 365 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 FBXO38Q6PIJ6 1188 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 DET1Q7L5Y6 550 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 SYVN1Q86TM6 617 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 KMT5CQ86Y97 462 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 LURAP1LQ8IV03 231 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 RHOT2Q8IXI1 618 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 RHOT1Q8IXI2 618 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 ZNF567Q8N184 647 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 D2HGDHQ8N465 521 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 IPMKQ8NFU5 416 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 OR8K1Q8NGG5 319 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 PPM1MQ96MI6 270 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 INSM2Q96T92 566 aaPredicted RBP15.97■□□□□ 0.15
LIG1-205ENST00000593425 CD180Q99467 661 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 GPR87Q9BY21 358 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 WWP1Q9H0M0 922 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 HRASLS2Q9NWW9 162 aa15.97■□□□□ 0.15
LIG1-205ENST00000593425 DDX56Q9NY93 547 aaKnown RBP15.97■□□□□ 0.15
LIG1-205ENST00000593425 KLHL8Q9P2G9 620 aaPredicted RBP15.97■□□□□ 0.15
LIG1-205ENST00000593425 UBA6A0AVT1 1052 aaPredicted RBP15.96■□□□□ 0.15
LIG1-205ENST00000593425 ARGFXA6NJG6 315 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 CST8O60676 142 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 CPNE3O75131 537 aaKnown RBP15.96■□□□□ 0.15
LIG1-205ENST00000593425 SCRG1O75711 98 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 EPOP01588 193 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 COMTP21964 271 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 GNLYP22749 145 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 ARCN1P48444 511 aaKnown RBP15.96■□□□□ 0.15
LIG1-205ENST00000593425 NR2C2P49116 596 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 ARL4DP49703 201 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 HSD11B2P80365 405 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 ITGA9Q13797 1035 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 NADK2Q4G0N4 442 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 PRAMEF17Q5VTA0 474 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 METRNLQ641Q3 311 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 KAZNQ674X7 775 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 HIST2H2BCQ6DN03 193 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 ZC3H18Q86VM9 953 aaKnown RBP15.96■□□□□ 0.15
LIG1-205ENST00000593425 BPHLQ86WA6 291 aaPredicted RBP15.96■□□□□ 0.15
LIG1-205ENST00000593425 OOSP2Q86WS3 158 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 TMEM126BQ8IUX1 230 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 SLC38A9Q8NBW4 561 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 SPDYE1Q8NFV5 336 aaPredicted RBP15.96■□□□□ 0.15
LIG1-205ENST00000593425 SEC14L1Q92503 715 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 ZNF501Q96CX3 271 aaPredicted RBP15.96■□□□□ 0.15
LIG1-205ENST00000593425 FCRL5Q96RD9 977 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 SMOXQ9NWM0 555 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.96■□□□□ 0.15
LIG1-205ENST00000593425 HACD3Q9P035 362 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 FAM8A1Q9UBU6 413 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 SLC24A2Q9UI40 661 aa15.96■□□□□ 0.15
LIG1-205ENST00000593425 DNMT3AQ9Y6K1 912 aaPredicted RBP15.96■□□□□ 0.15
LIG1-205ENST00000593425 TTLL8A6PVC2 850 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 DDX3YO15523 660 aaKnown RBP15.95■□□□□ 0.14
LIG1-205ENST00000593425 PRAMEF1O95521 474 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 HLA-DPA1P20036 260 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 MSH3P20585 1137 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 AKT1P31749 480 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 KPNA2P52292 529 aaKnown RBP15.95■□□□□ 0.14
LIG1-205ENST00000593425 RPS15P62841 145 aaKnown RBP15.95■□□□□ 0.14
LIG1-205ENST00000593425 TUBB4BP68371 445 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 TUBB2AQ13885 445 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 CAPRIN2Q6IMN6 1127 aaKnown RBP15.95■□□□□ 0.14
LIG1-205ENST00000593425 LCN10Q6JVE6 187 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 SPOCD1Q6ZMY3 1216 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 ZNF517Q6ZMY9 492 aaPredicted RBP15.95■□□□□ 0.14
LIG1-205ENST00000593425 BZW1Q7L1Q6 419 aaKnown RBP15.95■□□□□ 0.14
LIG1-205ENST00000593425 CPT1CQ8TCG5 803 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 THAP4Q8WY91 577 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 MR1Q95460 341 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 HAUS1Q96CS2 278 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 C12orf66Q96MD2 445 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 SLC25A23Q9BV35 468 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 TUBB2BQ9BVA1 445 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 NHEJ1Q9H9Q4 299 aaPredicted RBP15.95■□□□□ 0.14
LIG1-205ENST00000593425 MLXIPLQ9NP71 852 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 ABHD10Q9NUJ1 306 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 FARSAQ9Y285 508 aaKnown RBP15.95■□□□□ 0.14
LIG1-205ENST00000593425 PKP3Q9Y446 797 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 PCSK5Q92824 1860 aa15.95■□□□□ 0.14
LIG1-205ENST00000593425 OR6C74A6NCV1 312 aa15.94■□□□□ 0.14
LIG1-205ENST00000593425 MGAT4DA6NG13 374 aa15.94■□□□□ 0.14
LIG1-205ENST00000593425 SPOPO43791 374 aa15.94■□□□□ 0.14
LIG1-205ENST00000593425 VPS4BO75351 444 aa15.94■□□□□ 0.14
LIG1-205ENST00000593425 ZBTB11O95625 1053 aaPredicted RBP15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms