RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 LPCAT1Q8NF37 534 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 MAML1Q92585 1016 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 STAMBPL1Q96FJ0 436 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ZDHHC12Q96GR4 267 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 TSGA13Q96PP4 275 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 SRPK1Q96SB4 655 aaKnown RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 TCF12Q99081 682 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 NAPGQ99747 312 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ZNF670Q9BS34 389 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ZSCAN5AQ9BUG6 496 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 NUP85Q9BW27 656 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ULBP3Q9BZM4 244 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 SPRY4Q9C004 299 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 ZNF71Q9NQZ8 489 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-226ENST00000591534 CTTNBP2NLQ9P2B4 639 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 KLHL3Q9UH77 587 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 KCNK6Q9Y257 313 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 RPS6KL1Q9Y6S9 549 aa9.3□□□□□ -0.92
BRCA1-226ENST00000591534 LRP4O75096 1905 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 LOC101059948A0A1B0GTJ6 334 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 ANKRD66B4E2M5 251 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 KMOO15229 486 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 RASSF9O75901 435 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 UBXN7O94888 489 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 SLC25A14O95258 325 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 ATP1A1P05023 1023 aaKnown RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 TUBBP07437 444 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 GP1BBP13224 206 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 XRCC1P18887 633 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 TNNT3P45378 269 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 DSC2Q02487 901 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 SLC25A11Q02978 314 aaKnown RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 ATP13A4Q4VNC1 1196 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 FAM182AQ5T1J6 154 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 ZFYVE27Q5T4F4 411 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 HENMT1Q5T8I9 393 aaKnown RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 C11orf63Q6NUN7 778 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 RFLNAQ6ZTI6 216 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 RASGRP3Q8IV61 690 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 REXO1L1PQ8IX06 675 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 FAM26EQ8N5C1 309 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 CCNYQ8ND76 341 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 FAM71BQ8TC56 605 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 MAIP1Q8WWC4 291 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 C9orf72Q96LT7 481 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 C16orf45Q96MC5 204 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 AGAP2Q99490 1192 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 DESI2Q9BSY9 194 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 SPATA16Q9BXB7 569 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 RASSF4Q9H2L5 321 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 OSGEPL1Q9H4B0 414 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 ZFYVE1Q9HBF4 777 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 TRIM39Q9HCM9 518 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 KLC4Q9NSK0 619 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 AMFRQ9UKV5 643 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 POLHQ9Y253 713 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 PRKAB1Q9Y478 270 aa9.29□□□□□ -0.92
BRCA1-226ENST00000591534 TLN1Q9Y490 2541 aaKnown RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 MN1Q10571 1320 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-226ENST00000591534 CCDC66A2RUB6 948 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 A6NCN8 305 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 PRR19A6NJB7 356 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 PDZK1P1A8MUH7 402 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 VEGFDO43915 354 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 MFSD11O43934 449 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 KCNJ13O60928 360 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 DLGAP3O95886 979 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 CD48P09326 243 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 IDSP22304 550 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 IL4RP24394 825 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 DLSTP36957 453 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 HALP42357 657 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 PAFAH1B1P43034 410 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 DCDC1P59894 354 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 GTF2H3Q13889 308 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 DPYSL3Q14195 570 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 PTPRRQ15256 657 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 INSCQ1MX18 579 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 SPRED3Q2MJR0 410 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 ZNF468Q5VIY5 522 aaPredicted RBP9.28□□□□□ -0.92
BRCA1-226ENST00000591534 TCTN3Q6NUS6 607 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 KLHL35Q6PF15 583 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 TMEM26Q6ZUK4 368 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 PEX26Q7Z412 305 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 DAAM2Q86T65 1068 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 LRRTM4Q86VH4 590 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 CCDC13Q8IYE1 715 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 UNC5BQ8IZJ1 945 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 TRAM1L1Q8N609 369 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 CEP112Q8N8E3 955 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 ACRBPQ8NEB7 543 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 CXorf40BQ96DE9 158 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 TTC25Q96NG3 672 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 MAK16Q9BXY0 300 aaKnown RBP9.28□□□□□ -0.92
BRCA1-226ENST00000591534 OR2AG1Q9H205 316 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 PDE7BQ9NP56 450 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 PRDM8Q9NQV8 689 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 POT1Q9NUX5 634 aa9.28□□□□□ -0.92
BRCA1-226ENST00000591534 PADI1Q9ULC6 663 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms