RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 GOLGA6BA6NDN3 693 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 NPIPB15A6NHN6 443 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 GOLGA8SH3BPF8 625 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 J3KR12 359 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 ALOX12BO75342 701 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 LRIG2O94898 1065 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 UNC5CO95185 931 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 JCHAINP01591 159 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 FTLP02792 175 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 CYP1A1P04798 512 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 ATP1A1P05023 1023 aaKnown RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 FAM228BP0C875 321 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 GOLGA6DP0CG33 693 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 XRCC1P18887 633 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 MST1P26927 711 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 SERPINA4P29622 427 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 CDH5P33151 784 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 ADRA1BP35368 520 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 SCNN1AP37088 669 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 SLC19A1P41440 591 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 TUBB4BP68371 445 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 ACY1Q03154 408 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 DPTQ07507 201 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 TUBB2AQ13885 445 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 GPR18Q14330 331 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 LONRF1Q17RB8 773 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 PTCHD3Q3KNS1 767 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 PLA2G4EQ3MJ16 856 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 ZNF385CQ66K41 422 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 E4F1Q66K89 784 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 IRGCQ6NXR0 463 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 RPUSD3Q6P087 351 aaKnown RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 CYB5D1Q6P9G0 228 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 WDR59Q6PJI9 974 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 TMEM207Q6UWW9 146 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 PPP1R32Q7Z5V6 425 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 TECPR1Q7Z6L1 1165 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 SRLQ86TD4 932 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 TSPAN33Q86UF1 283 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 BPHLQ86WA6 291 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 PHF13Q86YI8 300 aaPredicted RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 RAB43Q86YS6 212 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 SYTL1Q8IYJ3 562 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 D2HGDHQ8N465 521 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 TSEN2Q8NCE0 465 aaKnown RBP5.95□□□□□ -1.46
VPS25-204ENST00000589577 C3orf20Q8ND61 904 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 LRRN4CLQ8ND94 238 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 CATSPER1Q8NEC5 780 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 DNAJB8Q8NHS0 232 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 NUDT8Q8WV74 236 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 CPA5Q8WXQ8 436 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 SPOCK2Q92563 424 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 NINJ1Q92982 152 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 SCAMP4Q969E2 229 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 CNDP1Q96KN2 507 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 FER1L6-AS2Q96M78 137 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 CFAP57Q96MR6 1250 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 CHP1Q99653 195 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 MAP3K3Q99759 626 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 TUBB2BQ9BVA1 445 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 ATP13A3Q9H7F0 1226 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 SPTLC3Q9NUV7 552 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 P4HTMQ9NXG6 502 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 GOLGA6AQ9NYA3 693 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 UVRAGQ9P2Y5 699 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 CD84Q9UIB8 345 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 TINAGQ9UJW2 476 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 BTRCQ9Y297 605 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 MEGF8Q7Z7M0 2845 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 GTF3C1Q12789 2109 aa5.95□□□□□ -1.46
VPS25-204ENST00000589577 WASH4PA8MWX3 477 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 MYO1FO00160 1098 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 DDX3XO00571 662 aaKnown RBP eCLIP5.94□□□□□ -1.469e-14■■■□□ 17.4
VPS25-204ENST00000589577 DDX3YO15523 660 aaKnown RBP5.94□□□□□ -1.46
VPS25-204ENST00000589577 KIF5CO60282 957 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 CNOT3O75175 753 aaKnown RBP5.94□□□□□ -1.46
VPS25-204ENST00000589577 RNF8O76064 485 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 LCA5LO95447 670 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 HEXAP06865 529 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 KLK3P07288 261 aaPredicted RBP5.94□□□□□ -1.46
VPS25-204ENST00000589577 TMEM253P0C7T8 217 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 KRT3P12035 628 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 SLC2A4P14672 509 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 BRAFP15056 766 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 AMD1P17707 334 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 MMP8P22894 467 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 SDC4P31431 198 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 VIPR1P32241 457 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 CETN2P41208 172 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 GPR1P46091 355 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 CSNK1DP48730 415 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 MEOX1P50221 254 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 BCL2L1Q07817 233 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 PRKD1Q15139 912 aaPredicted RBP5.94□□□□□ -1.46
VPS25-204ENST00000589577 TLR1Q15399 786 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 C3AR1Q16581 482 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 ZFYVE27Q5T4F4 411 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 FAAH2Q6GMR7 532 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 CLEC9AQ6UXN8 241 aa5.94□□□□□ -1.46
VPS25-204ENST00000589577 MON1BQ7L1V2 547 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms