RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 FTH1P02794 183 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 JUNP05412 331 aaKnown RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 PRR35P0CG20 571 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 GM2AP17900 193 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 AOAHP28039 575 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 EIF2DP41214 584 aaKnown RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 HK3P52790 923 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 AP1S2P56377 157 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 ZNF33BQ06732 778 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 GTF2H2Q13888 395 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 KCNC3Q14003 757 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 GBX1Q14549 363 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 CBX2Q14781 532 aaPredicted RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 PPP1R3AQ16821 1122 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 CLEC6AQ6EIG7 209 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 GTF2H2CQ6P1K8 395 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 PRMT9Q6P2P2 845 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 ZNF765Q7L2R6 523 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 CYP2U1Q7Z449 544 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 DSG4Q86SJ6 1040 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 GPR149Q86SP6 731 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 RBM23Q86U06 439 aaKnown RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 GALNT13Q8IUC8 556 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 NPAS3Q8IXF0 933 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 DDIASQ8IXT1 998 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 MIER2Q8N344 545 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 CPA6Q8N4T0 437 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 DDHD1Q8NEL9 900 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 FBXO27Q8NI29 283 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 WDR60Q8WVS4 1066 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 ING5Q8WYH8 240 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 OR8D1Q8WZ84 308 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 DLG3Q92796 817 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 ATP6V1E2Q96A05 226 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 TUBGCP3Q96CW5 907 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 PPP1R36Q96LQ0 422 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 HOPXQ9BPY8 73 aaPredicted RBP10.23□□□□□ -0.77
VPS25-203ENST00000589520 BOCQ9BWV1 1114 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 SPATA16Q9BXB7 569 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 SLC12A9Q9BXP2 914 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 CD244Q9BZW8 370 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 VCX3BQ9H321 246 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 IKZF3Q9UKT9 509 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 C15orf41Q9Y2V0 281 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 L3MBTL1Q9Y468 752 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 LRRC42Q9Y546 428 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 ANGPTL3Q9Y5C1 460 aa10.23□□□□□ -0.77
VPS25-203ENST00000589520 GRXCR2A6NFK2 248 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 NCF1BA6NI72 391 aaPredicted RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 NCF1CA8MVU1 366 aaPredicted RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 HEPACAM2A8MVW5 462 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 K7EPI3 171 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 PIP5K1BO14986 540 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 NPC1O15118 1278 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 CSPG5O95196 566 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 STAMBPO95630 424 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 NPPAP01160 153 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 EBLN1P0CF75 366 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 NCF1P14598 390 aaPredicted RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 MYOGP15173 224 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 CYP2A7P20853 494 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 ME2P23368 584 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 ITGB7P26010 798 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 GGT5P36269 586 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 VHLP40337 213 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 NRIP1P48552 1158 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 PLOD1Q02809 727 aaPredicted RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 MAD2L1Q13257 205 aaPredicted RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 HNRNPA1L2Q32P51 320 aaKnown RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 PDCD4Q53EL6 469 aaKnown RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 AGKQ53H12 422 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 XKR7Q5GH72 579 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 FAM78AQ5JUQ0 283 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 TMEM198Q66K66 360 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 ZFP1Q6P2D0 407 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 TMC5Q6UXY8 1006 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 PRR23BQ6ZRT6 265 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 TECPR1Q7Z6L1 1165 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 MILR1Q7Z6M3 343 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 SYVN1Q86TM6 617 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 PHYKPLQ8IUZ5 450 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 CYB5D2Q8WUJ1 264 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 BTN2A2Q8WVV5 523 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 ASZ1Q8WWH4 475 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 FGF13Q92913 245 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 RAB7BQ96AH8 199 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 RHBDF1Q96CC6 855 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 RCN3Q96D15 328 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 RSRC1Q96IZ7 334 aaKnown RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 EGFL8Q99944 293 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 NTMT1Q9BV86 223 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 NOL11Q9H8H0 719 aaKnown RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 WDR41Q9HAD4 459 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 PARVBQ9HBI1 364 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 ZFP14Q9HCL3 533 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 PCDH12Q9NPG4 1184 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 SDR39U1Q9NRG7 319 aaPredicted RBP10.22□□□□□ -0.77
VPS25-203ENST00000589520 GID8Q9NWU2 228 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 ZIM2Q9NZV7 527 aa10.22□□□□□ -0.77
VPS25-203ENST00000589520 EPS15L1Q9UBC2 864 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms