RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 CCDC59Q9P031 241 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SRRDQ9UH36 339 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 COPS3Q9UNS2 423 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PCDHA5Q9Y5H7 936 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 AP4B1Q9Y6B7 739 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 N4BP2Q86UW6 1770 aaPredicted RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 A0A087WXM4 84 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PRAMEF22A3QJZ6 481 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 MEGF11A6BM72 1044 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 CLCA1A8K7I4 914 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SH2B2O14492 632 aaPredicted RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 ATP2A1O14983 1001 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 ZBTB5O15062 677 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 HS6ST1O60243 411 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 EIF1BO60739 113 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PPP6R2O75170 966 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 USP12O75317 370 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 TRIM16O95361 564 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 H6PDO95479 791 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 LDOC1O95751 146 aaPredicted RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 GOT2P00505 430 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PRKCBP05771 671 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PROS1P07225 676 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 YES1P07947 543 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PSKH1P11801 424 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 GNSP15586 552 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 MALP21145 153 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 OXTRP30559 389 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 GGT5P36269 586 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 DDOSTP39656 456 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 EIF2S3P41091 472 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 EIF1P41567 113 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SLC15A1P46059 708 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 ATP12AP54707 1039 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 RPP30P78346 268 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 MC1RQ01726 317 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 DSC1Q08554 894 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 BNIP2Q12982 314 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 CALCOCO2Q13137 446 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SLC13A2Q13183 592 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 TDGQ13569 410 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 KRR1Q13601 381 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 NECTIN1Q15223 517 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 MTHFSDQ2M296 383 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 DCAF17Q5H9S7 520 aaPredicted RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 C1orf141Q5JVX7 400 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SAPCD1Q5SSQ6 148 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PRAMEF18Q5VWM3 479 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 RAP1GAP2Q684P5 730 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 GALNT18Q6P9A2 607 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 VSTM1Q6UX27 236 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 ZNF852Q6ZMS4 543 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 NEK8Q86SG6 692 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 MCUQ8NE86 351 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 OR52H1Q8NGJ2 320 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 OR56A3Q8NH54 315 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 CLEC4DQ8WXI8 215 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 HOXB13Q92826 284 aaPredicted RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 EID2BQ96D98 161 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 DCUN1D1Q96GG9 259 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 FOPNLQ96NB1 174 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SERPINB11Q96P15 392 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PSMB7Q99436 277 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 OR10A4Q9H209 315 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 EPB41L4BQ9H329 900 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SEPSECSQ9HD40 501 aaKnown RBP5.58□□□□□ -1.52
LINC01538-201ENST00000588074 NECTIN3Q9NQS3 549 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 CNNM1Q9NRU3 951 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 TDP1Q9NUW8 608 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 ADPRHL2Q9NX46 363 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SMARCAL1Q9NZC9 954 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 HMG20BQ9P0W2 317 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 VPS54Q9P1Q0 977 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 HSF4Q9ULV5 492 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 SNX6Q9UNH7 406 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 ACTL7AQ9Y615 435 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 AP1M2Q9Y6Q5 423 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 PMF1-BGLAPU3KQ54 211 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 X6R8D5 127 aa5.58□□□□□ -1.52
LINC01538-201ENST00000588074 USP32Q8NFA0 1604 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 TRBV23OR9-2A0A075B6M9 112 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 UBE2CO00762 179 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 FPGTO14772 594 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 THAP12O43422 761 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 CIDEAO60543 219 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 SOCS5O75159 536 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 BEST1O76090 585 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 CAMTA2O94983 1202 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 CCNB2O95067 398 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 BCL10O95999 233 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 TK1P04183 234 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 TRAPPC2P0DI81 140 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 TRAPPC2BP0DI82 140 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 SOX8P57073 446 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 BST2Q10589 180 aaKnown RBP5.57□□□□□ -1.52
LINC01538-201ENST00000588074 BNIP3Q12983 259 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 PMS2P3Q13401 168 aa5.57□□□□□ -1.52
LINC01538-201ENST00000588074 COL9A3Q14050 684 aaPredicted RBP5.57□□□□□ -1.52
LINC01538-201ENST00000588074 TOB2Q14106 344 aaPredicted RBP5.57□□□□□ -1.52
LINC01538-201ENST00000588074 TRIP10Q15642 601 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms