RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SPNS2Q8IVW8 549 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 LGI2Q8N0V4 545 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 C19orf43Q9BQ61 176 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 OSBPL10Q9BXB5 764 aa18.33■□□□□ 0.52
DDX39A-206ENST00000587730 UPK1AO00322 258 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 RAD51BO15315 384 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 STX7O15400 261 aaKnown RBP18.32■□□□□ 0.52
DDX39A-206ENST00000587730 RGS14O43566 566 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 CLDN11O75508 207 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 PRDX3P30048 256 aaKnown RBP18.32■□□□□ 0.52
DDX39A-206ENST00000587730 MC4RP32245 332 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 MTHFRP42898 656 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 CD97P48960 835 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 TAF10Q12962 218 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 NR6A1Q15406 480 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 FGD3Q5JSP0 725 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 OTUD3Q5T2D3 398 aaPredicted RBP18.32■□□□□ 0.52
DDX39A-206ENST00000587730 SDHAF4Q5VUM1 108 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 C16orf87Q6PH81 154 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 STK32CQ86UX6 486 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 FAM9CQ8IZT9 166 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 KLHL23Q8NBE8 558 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 OR2T12Q8NG77 320 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 C2orf15Q8WU43 125 aaKnown RBP18.32■□□□□ 0.52
DDX39A-206ENST00000587730 ACDQ96AP0 544 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 PHF12Q96QT6 1004 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 ACOX2Q99424 681 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 FANCEQ9HB96 536 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 ASIC5Q9NY37 505 aa18.32■□□□□ 0.52
DDX39A-206ENST00000587730 ILVBLA1L0T0 632 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 NCF1BA6NI72 391 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 NCF1CA8MVU1 366 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 SLC28A1O00337 649 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 LSM1O15116 133 aaKnown RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 WDR47O94967 919 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 ARHGEF15O94989 841 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 IL6P05231 212 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 ZDHHC11BP0C7U3 371 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 NCF1P14598 390 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 UGT1A1P22309 533 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 UGT1A4P22310 534 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 CRHBPP24387 322 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 GRK4P32298 578 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 UGT1A3P35503 534 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 UGT1A5P35504 534 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 GPR15P49685 360 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 ERVPABLB-1P60509 514 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 YBX1P67809 324 aaKnown RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 PLCL1Q15111 1095 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 CTXN3Q4LDR2 81 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 NADSYN1Q6IA69 706 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 IL27RAQ6UWB1 636 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 CIR1Q86X95 450 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 ADHFE1Q8IWW8 467 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 SIDT2Q8NBJ9 832 aaKnown RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 PDZD8Q8NEN9 1154 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 EEF1AKMT1Q8WVE0 214 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 SLC13A3Q8WWT9 602 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 ZIC5Q96T25 663 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 C17orf80Q9BSJ5 609 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 BEGAINQ9BUH8 593 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 C3orf18Q9UK00 162 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 AGO1Q9UL18 857 aaKnown RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 DHRS7Q9Y394 339 aa18.31■□□□□ 0.52
DDX39A-206ENST00000587730 HEMK1Q9Y5R4 338 aaPredicted RBP18.31■□□□□ 0.52
DDX39A-206ENST00000587730 ANKRD28O15084 1053 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 ZSCAN9O15535 394 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-206ENST00000587730 ACSL4O60488 711 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 CLPXO76031 633 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 TBX18O95935 607 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 CAPN1P07384 714 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 RETP07949 1114 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 SLC10A3P09131 477 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 NFKBIAP25963 317 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 HK3P52790 923 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 TPD52P55327 224 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-206ENST00000587730 AP5B1Q2VPB7 878 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 CTSL3PQ5NE16 218 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 DUS1LQ6P1R4 473 aaKnown RBP18.3■□□□□ 0.52
DDX39A-206ENST00000587730 CHST9Q7L1S5 443 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 NECAB2Q7Z6G3 386 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 TTC30BQ8N4P2 665 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 MDGA1Q8NFP4 955 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 PPM1MQ96MI6 270 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 FAM193BQ96PV7 902 aaPredicted RBP18.3■□□□□ 0.52
DDX39A-206ENST00000587730 SLAMF8Q9P0V8 285 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 ORC6Q9Y5N6 252 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 SNX5Q9Y5X3 404 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 H0Y858 1186 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 ENPP3O14638 875 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 NIPSNAP2O75323 286 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 HMBSP08397 361 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 G6PDP11413 515 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 RGS4P49798 205 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 PHEXP78562 749 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 CACNG1Q06432 222 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 GTF2H2Q13888 395 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 ZC3H12BQ5HYM0 836 aaKnown RBP18.3■□□□□ 0.52
DDX39A-206ENST00000587730 CACHD1Q5VU97 1274 aa18.3■□□□□ 0.52
DDX39A-206ENST00000587730 MFSD14CQ5VZR4 134 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms