RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 CD180Q99467 661 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 NRTNQ99748 197 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 TUBB2BQ9BVA1 445 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 MFRPQ9BY79 579 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 GLOD4Q9HC38 313 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 CASS4Q9NQ75 786 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 ACSS2Q9NR19 701 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 UBP1Q9NZI7 540 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 IL17CQ9P0M4 197 aa11.6□□□□□ -0.55
BRCA1-225ENST00000586385 BZW2Q9Y6E2 419 aaKnown RBP11.6□□□□□ -0.55
BRCA1-225ENST00000586385 LOC285095A0A1B0GVY8 99 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 OR2AG2A6NM03 316 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 ZNF487B1APH4 448 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 MEN1O00255 615 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 BUD23O43709 281 aaKnown RBP11.59□□□□□ -0.55
BRCA1-225ENST00000586385 SGTAO43765 313 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 KRT86O43790 486 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 PTPN3P26045 913 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 HALP42357 657 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 ARCN1P48444 511 aaKnown RBP11.59□□□□□ -0.55
BRCA1-225ENST00000586385 RPS15P62841 145 aaKnown RBP11.59□□□□□ -0.55
BRCA1-225ENST00000586385 TEX44Q53QW1 395 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 GPRC6AQ5T6X5 926 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 METRNLQ641Q3 311 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 CYB5D1Q6P9G0 228 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 TMEM220Q6QAJ8 160 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 TMEM126BQ8IUX1 230 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 RHOT1Q8IXI2 618 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 DSELQ8IZU8 1212 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 ZBTB2Q8N680 514 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 BEND7Q8N7W2 519 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-225ENST00000586385 ENDOVQ8N8Q3 282 aaKnown RBP11.59□□□□□ -0.55
BRCA1-225ENST00000586385 DDHD1Q8NEL9 900 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 DTX3LQ8TDB6 740 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 CBX8Q9HC52 389 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 LATS2Q9NRM7 1088 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 KCND1Q9NSA2 647 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 IMP3Q9NV31 184 aaKnown RBP11.59□□□□□ -0.55
BRCA1-225ENST00000586385 HRASLS2Q9NWW9 162 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 CTTNBP2NLQ9P2B4 639 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 SLC24A2Q9UI40 661 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 ERRFI1Q9UJM3 462 aaPredicted RBP11.59□□□□□ -0.55
BRCA1-225ENST00000586385 BTRCQ9Y297 605 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 ZNF451Q9Y4E5 1061 aa11.59□□□□□ -0.55
BRCA1-225ENST00000586385 LRRD1A4D1F6 860 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 OR6C74A6NCV1 312 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 SMTNL1A8MU46 457 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 ZNF185O15231 689 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 KCNJ13O60928 360 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 TMEM63AO94886 807 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 ZBTB11O95625 1053 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 LDLRP01130 860 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 RAB40ALP0C0E4 278 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 VCLP18206 1134 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 PBLDP30039 288 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 DCTP40126 519 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 WNT3AP56704 352 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 ZBED6P86452 979 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 WASHC5Q12768 1159 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 GTF2H3Q13889 308 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 PTPRCAPQ14761 206 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 PLCL1Q15111 1095 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 PRKD1Q15139 912 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 NFKBIBQ15653 356 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 SIRPB2Q5JXA9 342 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 KLHL35Q6PF15 583 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 FAM151BQ6UXP7 276 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 TMEM151BQ8IW70 566 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 LILRA3Q8N6C8 439 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 GLIS1Q8NBF1 620 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 OR1L3Q8NH93 324 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 GDAP1Q8TB36 358 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 BRSK1Q8TDC3 778 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 CPLX3Q8WVH0 158 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 OXNAD1Q96HP4 312 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 RMDN2Q96LZ7 410 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 TEKT5Q96M29 485 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 ZNF830Q96NB3 372 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 SMAD5Q99717 465 aaKnown RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 TLR10Q9BXR5 811 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 XPO4Q9C0E2 1151 aaKnown RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 WWP1Q9H0M0 922 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 PCMTD2Q9NV79 361 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 UVRAGQ9P2Y5 699 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 SAE1Q9UBE0 346 aaPredicted RBP11.58□□□□□ -0.56
BRCA1-225ENST00000586385 TCFL5Q9UL49 500 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 CAPN11Q9UMQ6 739 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 PCDHGB7Q9Y5F8 929 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 CACNA1DQ01668 2161 aa11.58□□□□□ -0.56
BRCA1-225ENST00000586385 SSU72P8A0A1W2PR75 194 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 UBA6A0AVT1 1052 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 SLC9B1P1A6NJY1 282 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 A6NL46 340 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 F5H423 210 aaPredicted RBP11.57□□□□□ -0.56
BRCA1-225ENST00000586385 APOL1O14791 398 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 DDAH2O95865 285 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 GYPCP04921 128 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 SPAM1P38567 509 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 ATP1A4Q13733 1029 aa11.57□□□□□ -0.56
BRCA1-225ENST00000586385 PDK1Q15118 436 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms