RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 CCDC86Q9H6F5 360 aaKnown RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 SYBUQ9NX95 663 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 GNPTGQ9UJJ9 305 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 PCDHB1Q9Y5F3 818 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 COLEC10Q9Y6Z7 277 aa13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 COL27A1Q8IZC6 1860 aaPredicted RBP13.55□□□□□ -0.24
PRKCSH-202ENST00000585540 IGHV1OR21-1A0A087WYE8 117 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 A0A1W2PQM1 296 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 PPM1DO15297 605 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 RAD51CO43502 376 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 TOP3BO95985 862 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 POLBP06746 335 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 MYF5P13349 255 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 DEKP35659 375 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 LSSP48449 732 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 CCL7P80098 99 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 ZFP36L1Q07352 338 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 ILF2Q12905 390 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 CBLBQ13191 982 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 TYSND1Q2T9J0 566 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 IZUMO3Q5VZ72 239 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 CASC4Q6P4E1 433 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 TMEM71Q6P5X7 295 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 WDR74Q6RFH5 385 aaPredicted RBP13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 TMEM26Q6ZUK4 368 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 DET1Q7L5Y6 550 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 TMEM135Q86UB9 458 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 PLXDC1Q8IUK5 500 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 PIANPQ8IYJ0 282 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 PDIK1LQ8N165 341 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 OR4D9Q8NGE8 314 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 SNF8Q96H20 258 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 PHACTR1Q9C0D0 580 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 RAB33BQ9H082 229 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 COG4Q9H9E3 785 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 POLR1BQ9H9Y6 1135 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 PRDM8Q9NQV8 689 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 INTS10Q9NVR2 710 aaKnown RBP13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 SLC2A6Q9UGQ3 507 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 RABGEF1Q9UJ41 708 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 ENTPD2Q9Y5L3 495 aa13.54□□□□□ -0.24
PRKCSH-202ENST00000585540 CCDC78A2IDD5 438 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 GOLGA8MH3BSY2 632 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 MATN2O00339 956 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 CCL22O00626 93 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 TOX3O15405 576 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 CD3EAPO15446 510 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 SGTAO43765 313 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 MTHFD1P11586 935 aaKnown RBP13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 BRAFP15056 766 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 PGAM1P18669 254 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 SPINK2P20155 84 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 IVDP26440 423 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 CA5AP35218 305 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 SLC19A1P41440 591 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 ERVPABLB-1P60509 514 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 NFE2L1Q14494 772 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 TMED2Q15363 201 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 CYB5D1Q6P9G0 228 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 SLITRK4Q8IW52 837 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 CARFQ8N187 725 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 PATE1Q8WXA2 126 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 ZNF778Q96MU6 729 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 ZNF578Q96N58 590 aaPredicted RBP13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 CMKLR1Q99788 373 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 CARD6Q9BX69 1037 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 TRIM31Q9BZY9 425 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 RAB17Q9H0T7 212 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 FAM96AQ9H5X1 160 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 SYNDIG1Q9H7V2 258 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 EPB41L5Q9HCM4 733 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 COMMD10Q9Y6G5 202 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 RPS6KL1Q9Y6S9 549 aa13.53□□□□□ -0.24
PRKCSH-202ENST00000585540 PIKFYVEQ9Y2I7 2098 aa13.52□□□□□ -0.24
PRKCSH-202ENST00000585540 UNC13CQ8NB66 2214 aa13.52□□□□□ -0.24
PRKCSH-202ENST00000585540 TRABD2BA6NFA1 517 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 EFCAB8A8MWE9 144 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 B4GAT1O43505 415 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 NDUFS3O75489 264 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 SEC31AO94979 1220 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 VAPBO95292 243 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 EML2O95834 649 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 NMBRP28336 390 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 CD1CP29017 333 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 ALDH4A1P30038 563 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 PDX1P52945 283 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 LIMK2P53671 638 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 ARL4CP56559 192 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 OR1D5P58170 312 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 CRADDP78560 199 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 CALCOCO2Q13137 446 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 THOC5Q13769 683 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 RPE65Q16518 533 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 ANKRD20A4Q4UJ75 823 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 CAPRIN2Q6IMN6 1127 aaKnown RBP13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 HIBCHQ6NVY1 386 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 Q8N9G6 341 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 ASZ1Q8WWH4 475 aa13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 ZNF669Q96BR6 464 aaPredicted RBP13.52□□□□□ -0.25
PRKCSH-202ENST00000585540 MFSD3Q96ES6 412 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms