RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 TSTD2Q5T7W7 516 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 ZNF613Q6PF04 617 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 ATCAYQ86WG3 371 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 RAVER1Q8IY67 606 aaKnown RBP12.91□□□□□ -0.34
RNF43-208ENST00000584437 CRYBG2Q8N1P7 616 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 SRFBP1Q8NEF9 429 aaKnown RBP12.91□□□□□ -0.34
RNF43-208ENST00000584437 OR52J3Q8NH60 311 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 SPACA7Q96KW9 195 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 ZNF317Q96PQ6 595 aaPredicted RBP12.91□□□□□ -0.34
RNF43-208ENST00000584437 B3GNT5Q9BYG0 378 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 BHLHE41Q9C0J9 482 aaPredicted RBP12.91□□□□□ -0.34
RNF43-208ENST00000584437 STOX2Q9P2F5 926 aaPredicted RBP12.91□□□□□ -0.34
RNF43-208ENST00000584437 FAM198AQ9UFP1 575 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 MKLN1Q9UL63 735 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 PIK3C2BO00750 1634 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
RNF43-208ENST00000584437 A0A1W2PQ67 120 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 PDLIM1O00151 329 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 B4GALT5O43286 388 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 TLR5O60602 858 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 ZNF432O94892 652 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 TUBA1BP68363 451 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 FBXO43Q4G163 708 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 TUBA1AQ71U36 451 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 CYP4X1Q8N118 509 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 MGME1Q9BQP7 344 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 IGSF9Q9P2J2 1179 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 MRTO4Q9UKD2 239 aaKnown RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 ZNF510Q9Y2H8 683 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 CHD1O14646 1710 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 ISM1B1AKI9 464 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 SLC7A4O43246 635 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 RGS8P57771 180 aaPredicted RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 DCDC1P59894 354 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 CREMQ03060 361 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 RIPPLY1Q0D2K3 151 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 MOGQ16653 247 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 SLC30A8Q8IWU4 369 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 LIX1Q8N485 282 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 BEND7Q8N7W2 519 aaPredicted RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 ZNF570Q96NI8 536 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 NR2E1Q9Y466 385 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 LRRC42Q9Y546 428 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 RBM7Q9Y580 266 aaKnown RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 PXDNQ92626 1479 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 PER2O15055 1255 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 PRAMEF1O95521 474 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 DNTTP04053 509 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 CYP11A1P05108 521 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 CTSEP14091 401 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 L1CAMP32004 1257 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 NIPAL1Q6NVV3 410 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 NETO2Q8NC67 525 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 IL31RAQ8NI17 732 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 SIPA1Q96FS4 1042 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 FAXDC2Q96IV6 333 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 EBF4Q9BQW3 602 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 SNTG1Q9NSN8 517 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 C1orf109Q9NX04 203 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 MAP10Q9P2G4 905 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 TESMINQ9Y4I5 508 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 RIC1Q4ADV7 1423 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 OR6C75A6NL08 312 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 PDCD5O14737 125 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 MATN3O15232 486 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 NME6O75414 186 aaPredicted RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 RSL1D1O76021 490 aaKnown RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 CD247P20963 164 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 CRYBB1P53674 252 aaPredicted RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 TUBA3CQ13748 450 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 ZNF829Q3KNS6 432 aaPredicted RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 ZNF311Q5JNZ3 666 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 TRNT1Q96Q11 434 aaKnown RBP12.9□□□□□ -0.34
RNF43-208ENST00000584437 MGAT4AQ9UM21 535 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 PCDHGA3Q9Y5H0 932 aa12.9□□□□□ -0.34
RNF43-208ENST00000584437 ADGRB1O14514 1584 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 hCG_2039718K7EN88 272 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 ACOX3O15254 700 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 ZNF132P52740 706 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 SMARCB1Q12824 385 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 IQCCQ4KMZ1 466 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 MPPE1Q53F39 396 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 ULK3Q6PHR2 472 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 TMPRSS11BQ86T26 416 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 SPAG16Q8N0X2 631 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 TBATAQ96M53 351 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 TNKS2Q9H2K2 1166 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 GBA2Q9HCG7 927 aaPredicted RBP12.89□□□□□ -0.35
RNF43-208ENST00000584437 ACSS2Q9NR19 701 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 A0A0G2JPF8 293 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 HNRNPCL3B7ZW38 293 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 PITPNM1O00562 1244 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 OR4F21O95013 312 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 GADD45GO95257 159 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 C22orf31O95567 290 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 ASGR1P07306 291 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 HNRNPCL4P0DMR1 293 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 SMIM10L2AP0DMW4 78 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 SMIM10L2BP0DMW5 78 aa12.89□□□□□ -0.35
RNF43-208ENST00000584437 SPAM1P38567 509 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms