RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 HOXB3P14651 431 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 MPSTP25325 297 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 NMBRP28336 390 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 RBMS1P29558 406 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 CSF2RBP32927 897 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 NSG1P42857 185 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 EPHA4P54764 986 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 ZFP36L1Q07352 338 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 EIF3IQ13347 325 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 RPE65Q16518 533 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 LYPLAL1Q5VWZ2 237 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 CES3Q6UWW8 571 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 CERS6Q6ZMG9 384 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 TMEM26Q6ZUK4 368 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 RAB11FIP2Q7L804 512 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 SLITRK4Q8IW52 837 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 LSMEM2Q8N112 164 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 FBXO39Q8N4B4 442 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 HM13Q8TCT9 377 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 NCSTNQ92542 709 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 CCDC74BQ96LY2 380 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 DPYSL5Q9BPU6 564 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 CCM2Q9BSQ5 444 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 KCND1Q9NSA2 647 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 CATSPERZQ9NTU4 200 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 IMP3Q9NV31 184 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 AKAP7Q9P0M2 348 aaPredicted RBP12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 TMEM9Q9P0T7 183 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 SAMD15Q9P1V8 674 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 ACSL5Q9ULC5 683 aa12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 CFAP20Q9Y6A4 193 aaKnown RBP12.35□□□□□ -0.43
SMARCE1-218ENST00000582955 IGHV5-10-1A0A0J9YXX1 117 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 SRRM3A6NNA2 597 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 QSOX1O00391 747 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 FANCGO15287 622 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 AP2A2O94973 939 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 TNFSF15O95150 251 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 JMJD7P0C870 316 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 HGFP14210 728 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 TYRP1P17643 537 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 AMD1P17707 334 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 CASQ1P31415 396 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 PPARGP37231 505 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 LIMK2P53671 638 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 CFHR1Q03591 330 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 GPR18Q14330 331 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 TBC1D25Q3MII6 688 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 AARS2Q5JTZ9 985 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 SNAP47Q5SQN1 464 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 TMEM71Q6P5X7 295 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 ZNF449Q6P9G9 518 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 PACS1Q6VY07 963 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 ZNF574Q6ZN55 896 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 CAND1Q86VP6 1230 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 RBM12BQ8IXT5 1001 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 PPIL6Q8IXY8 311 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 MPP5Q8N3R9 675 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 LILRA3Q8N6C8 439 aaPredicted RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 RCBTB1Q8NDN9 531 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 MCUQ8NE86 351 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 OR4D9Q8NGE8 314 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 GPR150Q8NGU9 434 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 MFSD3Q96ES6 412 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 C12orf66Q96MD2 445 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 CMKLR1Q99788 373 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 KIFC1Q9BW19 673 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 EPB41L1Q9H4G0 881 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 COG4Q9H9E3 785 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 UCK1Q9HA47 277 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 MRM3Q9HC36 420 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 XAB2Q9HCS7 855 aaKnown RBP12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 SLC40A1Q9NP59 571 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 THSD1Q9NS62 852 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 TREX1Q9NSU2 369 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 PISDQ9UG56 409 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 LOXL2Q9Y4K0 774 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 PCDHGA8Q9Y5G5 932 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 PRSS21Q9Y6M0 314 aa12.34□□□□□ -0.43
SMARCE1-218ENST00000582955 C17orf113A0A1B0GUU1 675 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 F8W8V4 182 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 CD3EAPO15446 510 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 TLX3O43711 291 aaPredicted RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 OR1I1O60431 355 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 DXOO77932 396 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 UBXN7O94888 489 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 VAPBO95292 243 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 FTH1P02794 183 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 OR56A5P0C7T3 313 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 MTHFD1P11586 935 aaKnown RBP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 MLNP12872 115 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 PTGIRP43119 386 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 SQSTM1Q13501 440 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 TRA2AQ13595 282 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 PTK6Q13882 451 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 KRT33BQ14525 404 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 SEMA3AQ14563 771 aa12.33□□□□□ -0.44
SMARCE1-218ENST00000582955 C16orf72Q14CZ0 275 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms