RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 ACRV1P26436 265 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 STIP1P31948 543 aaKnown RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 FOXN2P32314 431 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 HADHAP40939 763 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 PREPP48147 710 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 ARCN1P48444 511 aaKnown RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 LMAN1P49257 510 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 PRLHRP49683 370 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 VPS41P49754 854 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 SEPHS1P49903 392 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 EPHA4P54764 986 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 SH3BP2P78314 561 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 CDH17Q12864 832 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 KIAA1614Q5VZ46 1190 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 METRNLQ641Q3 311 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 WDR74Q6RFH5 385 aaPredicted RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 WASH2PQ6VEQ5 465 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 CERS6Q6ZMG9 384 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 FAM92BQ6ZTR7 304 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 ZNF534Q76KX8 674 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 ARHGAP22Q7Z5H3 698 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 LDB1Q86U70 411 aaPredicted RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 SPNS2Q8IVW8 549 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 CFAP206Q8IYR0 622 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 SLC35F6Q8N357 371 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 AGBL5Q8NDL9 886 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 OR2L2Q8NH16 312 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 COG1Q8WTW3 980 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 DCUN1D1Q96GG9 259 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 PPM1MQ96MI6 270 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 TRIM56Q9BRZ2 755 aaKnown RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 FRMD8P1Q9BZ68 369 aaPredicted RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 WASH6PQ9NQA3 447 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 TRMT1Q9NXH9 659 aaKnown RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 ZDHHC3Q9NYG2 299 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 FEZ2Q9UHY8 353 aaPredicted RBP12.31□□□□□ -0.44
CBX1-206ENST00000581003 SSUH2Q9Y2M2 353 aa12.31□□□□□ -0.44
CBX1-206ENST00000581003 TEX51A0A1B0GUA7 166 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 MGAT4DA6NG13 374 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 H7C0S8 307 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 CAPN5O15484 640 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 OR1I1O60431 355 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 ZNF189O75820 626 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 GOT2P00505 430 aaKnown RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 F7P08709 466 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 ATP1B2P14415 290 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 VCLP18206 1134 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 PDHA2P29803 388 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 CSTF2P33240 577 aaKnown RBP eCLIP12.3□□□□□ -0.44
CBX1-206ENST00000581003 FDFT1P37268 417 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 HALP42357 657 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 CAPZBP47756 277 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 TMPRSS3P57727 454 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 SESN2P58004 480 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 BASP1P80723 227 aaKnown RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 PDE1BQ01064 536 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 TRA2AQ13595 282 aaKnown RBP eCLIP12.3□□□□□ -0.442e-6■■■■■ 27.7
CBX1-206ENST00000581003 CLPPQ16740 277 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 TSTD2Q5T7W7 516 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 ANKRD22Q5VYY1 191 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 FBXO38Q6PIJ6 1188 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 CES3Q6UWW8 571 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 STYXQ8WUJ0 223 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 HDAC10Q969S8 669 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 TMEM159Q96B96 161 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 SH3KBP1Q96B97 665 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 ULK4Q96C45 1275 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 C9orf72Q96LT7 481 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 C12orf66Q96MD2 445 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 UCK1Q9HA47 277 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 CHRAC1Q9NRG0 131 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 SIDT1Q9NXL6 827 aaKnown RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 PAK5Q9P286 719 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 MARCH4Q9P2E8 410 aaPredicted RBP12.3□□□□□ -0.44
CBX1-206ENST00000581003 TCAF1Q9Y4C2 921 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 UNC13CQ8NB66 2214 aa12.3□□□□□ -0.44
CBX1-206ENST00000581003 MGAQ8IWI9 3026 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 ZNF185O15231 689 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 PSMD3O43242 534 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 ZW10O43264 779 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 C9P02748 559 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 LIPCP11150 499 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 ZNF28P17035 718 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 AMD1P17707 334 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 PSMA3P25788 255 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 CYP4F2P78329 520 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 CACNG1Q06432 222 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 KCNAB1Q14722 419 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 BRD3Q15059 726 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 IRGCQ6NXR0 463 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 DRICH1Q6PGQ1 229 aaPredicted RBP12.29□□□□□ -0.44
CBX1-206ENST00000581003 GSTA5Q7RTV2 222 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 LINC00523Q86TU6 105 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 DTX1Q86Y01 620 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 LKAAEAR1Q8TD35 194 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 LRRC45Q96CN5 670 aa12.29□□□□□ -0.44
CBX1-206ENST00000581003 ELMO2Q96JJ3 720 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms