RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 KRT37O76014 449 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 KRT38O76015 456 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 CELA2BP08218 269 aaPredicted RBP15.27■□□□□ 0.04
SS18-216ENST00000580751 ACP5P13686 325 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 ZNF7P17097 686 aaPredicted RBP15.27■□□□□ 0.04
SS18-216ENST00000580751 PRLHRP49683 370 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 CTSCP53634 463 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 SEMA3AQ14563 771 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 TCEA2Q15560 299 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 INSCQ1MX18 579 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 TYSND1Q2T9J0 566 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 HSP90AA5PQ58FG0 334 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 TNFAIP8L3Q5GJ75 292 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 UBAP2Q5T6F2 1119 aaKnown RBP15.27■□□□□ 0.04
SS18-216ENST00000580751 ZNF470Q6ECI4 717 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 TMEM220Q6QAJ8 160 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 MICALCLQ6ZW33 695 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 DET1Q7L5Y6 550 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 ZNF547Q8IVP9 402 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 CTAGE3PQ8IX95 158 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 PPM1NQ8N819 430 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 OR4C6Q8NH72 309 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 OR2W6PQ8NHA6 318 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 UHMK1Q8TAS1 419 aaKnown RBP15.27■□□□□ 0.04
SS18-216ENST00000580751 RHBDD1Q8TEB9 315 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 SGF29Q96ES7 293 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 BOCQ9BWV1 1114 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 CAAP1Q9H8G2 361 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 CORO1CQ9ULV4 474 aaPredicted RBP15.27■□□□□ 0.04
SS18-216ENST00000580751 PRKAB1Q9Y478 270 aa15.27■□□□□ 0.04
SS18-216ENST00000580751 PCYT1BQ9Y5K3 369 aaPredicted RBP15.27■□□□□ 0.04
SS18-216ENST00000580751 CNOT1A5YKK6 2376 aaKnown RBP15.27■□□□□ 0.03
SS18-216ENST00000580751 POC1B-GALNT4F8VUJ3 575 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 GOLGA8TH3BQL2 631 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 YY2O15391 372 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 SH3BP5O60239 455 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 KCNJ13O60928 360 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 NDUFS3O75489 264 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 ERVK-10P10266 1014 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 GCAP28676 217 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 HOXD11P31277 338 aaPredicted RBP15.26■□□□□ 0.03
SS18-216ENST00000580751 ACTR1BP42025 376 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 CLCNKAP51800 687 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 ACTR1AP61163 376 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 SMAD1Q15797 465 aaKnown RBP15.26■□□□□ 0.03
SS18-216ENST00000580751 DEFB133Q30KQ1 61 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 PLA2G4EQ3MJ16 856 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 ZCCHC8Q6NZY4 707 aaKnown RBP15.26■□□□□ 0.03
SS18-216ENST00000580751 SLC30A9Q6PML9 568 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 AMZ2Q86W34 360 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 CILP2Q8IUL8 1156 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 EID2Q8N6I1 236 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 C2CD4AQ8NCU7 369 aaPredicted RBP15.26■□□□□ 0.03
SS18-216ENST00000580751 CCL4L1Q8NHW4 92 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 DCAKDQ8WVC6 231 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 SLC32A1Q9H598 525 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 SMYD2Q9NRG4 433 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 INTS10Q9NVR2 710 aaKnown RBP15.26■□□□□ 0.03
SS18-216ENST00000580751 FAM53CQ9NYF3 392 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 IL1RAPL1Q9NZN1 696 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 NCKIPSDQ9NZQ3 722 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 PCOLCE2Q9UKZ9 415 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 BTBD3Q9Y2F9 522 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 ACTL7BQ9Y614 415 aa15.26■□□□□ 0.03
SS18-216ENST00000580751 ARID1BQ8NFD5 2236 aaPredicted RBP15.26■□□□□ 0.03
SS18-216ENST00000580751 CXorf49A8MYA2 514 aaPredicted RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 PRMT5O14744 637 aaPredicted RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 FTH1P02794 183 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 SNRPAP09012 282 aaKnown RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 GSTM1P09488 218 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 OR56A5P0C7T3 313 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 GIMD1P0DJR0 217 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 CSRP1P21291 193 aaKnown RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 AK4P27144 223 aaPredicted RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 SPRP35270 261 aaPredicted RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 LEPRP48357 1165 aaKnown RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 GSTM4Q03013 218 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 DMPKQ09013 629 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 RSPO4Q2I0M5 234 aaPredicted RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 C6orf132Q5T0Z8 1188 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 C11orf96Q7Z7L8 435 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 PIP4P1Q86T03 277 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 LDB1Q86U70 411 aaPredicted RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 NRROSQ86YC3 692 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 CLDN19Q8N6F1 224 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 FAM46DQ8NEK8 389 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 EPS8L3Q8TE67 593 aaKnown RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 GLMNQ92990 594 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 CCDC97Q96F63 343 aaPredicted RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 ATP6V1G3Q96LB4 118 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 LINC00615Q96LM1 132 aaPredicted RBP15.25■□□□□ 0.03
SS18-216ENST00000580751 CDC6Q99741 560 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 RTKNQ9BST9 563 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 MCMBPQ9BTE3 642 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 TSSK1BQ9BXA7 367 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 KLC4Q9NSK0 619 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 EVA1BQ9NVM1 165 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 TAAR2Q9P1P5 351 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 FTSJ1Q9UET6 329 aa15.25■□□□□ 0.03
SS18-216ENST00000580751 FBXO5Q9UKT4 447 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms