RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 GLG1Q92896 1179 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 RAB7BQ96AH8 199 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM186Q96B77 213 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 CTHRC1Q96CG8 243 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 SPACA9Q96E40 222 aaPredicted RBP3.11□□□□□ -1.91
KPNB1-208ENST00000580019 WDYHV1Q96HA8 205 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 HARBI1Q96MB7 349 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 BBS4Q96RK4 519 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 NUDCD1Q96RS6 583 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 NAP1L3Q99457 506 aaPredicted RBP3.11□□□□□ -1.91
KPNB1-208ENST00000580019 SLX1AQ9BQ83 275 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 NTPCRQ9BSD7 190 aaKnown RBP3.11□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM79Q9BSE2 394 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 THUMPD2Q9BTF0 503 aaKnown RBP3.11□□□□□ -1.91
KPNB1-208ENST00000580019 TPSD1Q9BZJ3 242 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 RTN4RQ9BZR6 473 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 AMBRA1Q9C0C7 1298 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 PLEKHA4Q9H4M7 779 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 CNOT10Q9H9A5 744 aaKnown RBP3.11□□□□□ -1.91
KPNB1-208ENST00000580019 EPB41L5Q9HCM4 733 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 DDX4Q9NQI0 724 aaKnown RBP3.11□□□□□ -1.91
KPNB1-208ENST00000580019 SPG21Q9NZD8 308 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 AIPL1Q9NZN9 384 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 SPASTQ9UBP0 616 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 FBXO40Q9UH90 709 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 PCSK1NQ9UHG2 260 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 FBXW11Q9UKB1 542 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 ITM2BQ9Y287 266 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 WBP11Q9Y2W2 641 aaKnown RBP3.11□□□□□ -1.91
KPNB1-208ENST00000580019 CAB39Q9Y376 341 aaPredicted RBP3.11□□□□□ -1.91
KPNB1-208ENST00000580019 PKP3Q9Y446 797 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 FAM205AQ6ZU69 1335 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 NPHP3Q7Z494 1330 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 AATKQ6ZMQ8 1374 aa3.11□□□□□ -1.91
KPNB1-208ENST00000580019 ABCC3O15438 1527 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PRDM15P57071 1507 aaPredicted RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ARHGAP5Q13017 1502 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 UNC13BO14795 1591 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 A0A1B0GTW7 788 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 YDJCA8MPS7 323 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 C17orf100A8MU93 164 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 MCIDASD6RGH6 385 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PPM1DO15297 605 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 SLC16A3O15427 465 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PLRG1O43660 514 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 SSX5O60225 188 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 GMFGO60234 142 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 KIAA0754O94854 1291 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 KCNK5O95279 499 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 VNN1O95497 513 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ADCY5O95622 1261 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 DIRAS3O95661 229 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 GH1P01241 217 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TPBGLP0DKB5 382 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PCNAP12004 261 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 VPREB1P12018 145 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 AREGP15514 252 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ANXA7P20073 488 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 RPA1P27694 616 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TMOD1P28289 359 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 MDH1P40925 334 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PTPN9P43378 593 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 CENPAP49450 140 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 AGTR2P50052 363 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 CLCN3P51790 818 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 EFNA5P52803 228 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ARSFP54793 590 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 SLC37A1P57057 533 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ECT2LQ008S8 904 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 DEUP1Q05D60 604 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 MZT1Q08AG7 82 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ACSM1Q08AH1 577 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 SCGB2A2Q13296 93 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 KRT33BQ14525 404 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 UGP2Q16851 508 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 CD300EQ496F6 205 aaPredicted RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 RIPPLY2Q5TAB7 128 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TMEM268Q5VZI3 342 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 CENPPQ6IPU0 288 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 CASC4Q6P4E1 433 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ZCCHC12Q6PEW1 402 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 AFTPHQ6ULP2 937 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PTCHD4Q6ZW05 846 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 DET1Q7L5Y6 550 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TRAPPC11Q7Z392 1133 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TDRPQ86YL5 185 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 LAS2Q8IYD9 372 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PM20D2Q8IYS1 436 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ADGRG5Q8IZF4 528 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 BATF2Q8N1L9 274 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 SCAIQ8N9R8 606 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 SLC4A11Q8NBS3 891 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 NCOA7Q8NI08 942 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 ROBO4Q8WZ75 1007 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 AKAP1Q92667 903 aaKnown RBP eCLIP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 PABPC5Q96DU9 382 aaKnown RBP3.1□□□□□ -1.91
KPNB1-208ENST00000580019 TBCDQ9BTW9 1192 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 CARD6Q9BX69 1037 aa3.1□□□□□ -1.91
KPNB1-208ENST00000580019 RNF26Q9BY78 433 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms